Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC122108.2-201ENST00000611946 526 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 AC090517.2-201ENST00000614966 680 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NXF3Q9H4D5 ZNF702P-202ENST00000434269 1966 ntBASIC1.76□□□□□ -2.13
NXF3Q9H4D5 RNU6-105P-201ENST00000363909 104 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 RNU6-522P-201ENST00000364497 107 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.505-201ENST00000384489 102 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 RNU1-57P-201ENST00000384491 166 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 RN7SKP101-201ENST00000411376 320 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AL117339.3-201ENST00000418733 162 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.75□□□□□ -2.13
NXF3Q9H4D5 ERLEC1P1-201ENST00000433806 578 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.75□□□□□ -2.13
NXF3Q9H4D5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.75□□□□□ -2.13
NXF3Q9H4D5 RNU7-138P-201ENST00000459479 64 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC140059.1-201ENST00000489238 361 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 RNU6-377P-201ENST00000515965 102 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC026271.5-201ENST00000577873 130 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC010525.2-201ENST00000590920 195 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AC073410.2-201ENST00000603240 332 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AL713866.2-201ENST00000603579 219 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 AL645939.4-201ENST00000604495 135 ntBASIC1.75□□□□□ -2.13
NXF3Q9H4D5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 MIR378A-201ENST00000362177 66 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 SNORD56.1-201ENST00000362913 68 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.256-201ENST00000364594 104 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 RNU4-12P-201ENST00000365233 139 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 RPS29P13-201ENST00000402041 169 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AL356432.1-201ENST00000405809 419 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 MIR548F1-201ENST00000408667 84 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 FCF1P9-201ENST00000412546 282 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AC138623.1-201ENST00000418060 216 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 BTF3P4-201ENST00000418852 495 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AL591043.1-201ENST00000432461 424 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 UBE2V1P8-201ENST00000437166 265 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 snoU13.14-201ENST00000459372 104 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AC011352.1-201ENST00000512300 793 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 MTND1P35-201ENST00000526739 508 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 VN1R107P-201ENST00000601784 209 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 RNU6-85P-201ENST00000605989 107 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 uc_338.15-201ENST00000615470 191 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 MIR3688-2-201ENST00000636963 87 ntBASIC1.74□□□□□ -2.13
NXF3Q9H4D5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NXF3Q9H4D5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.89-201ENST00000363031 102 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 RNU6-529P-201ENST00000363383 104 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 RNU6-527P-201ENST00000363425 104 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 SNORA25B-201ENST00000365507 128 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 Y_RNA.573-201ENST00000384763 105 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 EIF4E2P1-201ENST00000393781 255 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 RNU2-23P-201ENST00000410545 195 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 EIF1P1-201ENST00000421436 341 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 MTND1P4-201ENST00000435196 415 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 HMGB1P18-201ENST00000438801 619 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC087854.1-201ENST00000519706 414 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC034114.1-201ENST00000520293 285 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 MIR5692C1-201ENST00000585309 91 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC023043.2-201ENST00000589678 1026 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC007792.1-201ENST00000623023 402 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 AC024614.3-201ENST00000637860 256 ntBASIC1.73□□□□□ -2.13
NXF3Q9H4D5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
NXF3Q9H4D5 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RNU6-428P-201ENST00000362942 107 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RNU6-534P-201ENST00000364877 106 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RNU6-336P-201ENST00000364891 107 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 HMGN2P39-201ENST00000398005 273 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RNU6-373P-201ENST00000411247 98 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 BX510359.4-201ENST00000423750 193 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RPL23AP6-201ENST00000446637 472 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 HMGN2P26-201ENST00000463169 339 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RPS29P25-201ENST00000481709 171 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms