Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 AL136964.1-201ENST00000622038 2990 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 RN7SKP213-201ENST00000410746 298 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 AL590762.4-201ENST00000425885 253 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 AC091912.1-201ENST00000511351 248 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 RNU6-958P-201ENST00000516995 106 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 RNU7-181P-201ENST00000517234 74 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 MIR4791-201ENST00000607666 84 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 AC073308.1-201ENST00000623696 305 ntBASIC5.79□□□□□ -1.48
RNF39Q9H2S5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF39Q9H2S5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 RNU1-146P-201ENST00000364015 165 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 AC244505.4-201ENST00000434905 287 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 SSXP5-201ENST00000443473 287 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 snoU13.29-201ENST00000459370 104 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 RNU7-137P-201ENST00000516788 62 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 SCARNA20.4-201ENST00000516969 131 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 AC079598.5-201ENST00000547460 117 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 HSPE1P5-201ENST00000561489 272 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 uc_338.25-201ENST00000613756 156 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 AC022149.2-201ENST00000621061 203 ntBASIC5.78□□□□□ -1.48
RNF39Q9H2S5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF39Q9H2S5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
RNF39Q9H2S5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 AC007336.1-201ENST00000576365 3828 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 MIR105-1-201ENST00000385222 81 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 RNA5SP113-201ENST00000410486 84 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 RPL12P3-201ENST00000440080 396 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 MIR4764-201ENST00000580680 88 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 AC006023.1-201ENST00000603944 259 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 DLEU2_4.2-201ENST00000616613 58 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 MAPK10-263ENST00000641052 4307 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 TNPO1P3-201ENST00000436471 2662 ntBASIC5.77□□□□□ -1.49
RNF39Q9H2S5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF39Q9H2S5 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 RNU6-1335P-201ENST00000365426 107 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 RNU4-64P-201ENST00000410795 131 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 RNU4-83P-201ENST00000410863 133 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 RNA5SP104-201ENST00000410989 118 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 AC023141.4-201ENST00000412031 328 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 RNU7-67P-201ENST00000459003 62 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 AP000753.3-201ENST00000604083 169 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 AC068870.2-201ENST00000620635 389 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF39Q9H2S5 AC083899.1-201ENST00000454465 3819 ntBASIC5.76□□□□□ -1.49
RNF39Q9H2S5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 MIR340-201ENST00000362125 95 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 RNA5SP443-201ENST00000363083 132 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 RNU6-753P-201ENST00000363926 107 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 SNORD90-201ENST00000391145 111 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 PTMAP2-201ENST00000397627 327 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 snoU13.17-201ENST00000458802 104 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 AC084357.1-201ENST00000473404 255 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 AC018868.1-201ENST00000491307 315 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 RPS29P11-201ENST00000496507 171 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 AC244107.2-201ENST00000611773 76 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms