Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 SNAP23P1-201ENST00000433229 246 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AC244670.1-201ENST00000436879 112 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 FTH1P25-201ENST00000447665 469 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 HMGN2P23-201ENST00000456759 269 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AC079140.5-201ENST00000507882 310 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AK3P2-201ENST00000507976 429 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AC012507.3-201ENST00000603556 477 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 RNU6-85P-201ENST00000605989 107 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 U2.17-201ENST00000611454 95 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 uc_338.34-201ENST00000617467 174 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 AP000560.1-201ENST00000624150 1937 ntBASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
POLR1EQ9GZS1 LINC02555-201ENST00000563933 1951 ntBASIC1.65□□□□□ -2.14
POLR1EQ9GZS1 MTND4P23-201ENST00000447723 1363 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 Y_RNA.255-201ENST00000364581 97 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 Y_RNA.409-201ENST00000383990 98 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 RNU4-55P-201ENST00000410731 137 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 RNA5SP100-201ENST00000410903 110 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 RNA5SP59-201ENST00000410922 110 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 HMGB1P18-201ENST00000438801 619 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 MTCO2P18-201ENST00000457151 658 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC091874.1-201ENST00000511402 339 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 MTND2P38-201ENST00000522536 667 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 MTND4P7-201ENST00000523876 130 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 MIR3169-201ENST00000578032 83 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC005786.1-201ENST00000588553 154 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC004223.2-201ENST00000590309 544 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 VN1R107P-201ENST00000601784 209 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.65□□□□□ -2.15
POLR1EQ9GZS1 AC006026.1-201ENST00000444025 1803 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 SNORD73A-201ENST00000386062 65 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL606923.1-201ENST00000406616 190 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 VN1R108P-201ENST00000431580 830 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL591806.2-201ENST00000433122 173 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL121601.2-201ENST00000438019 707 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 SNORA40.12-201ENST00000516329 111 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 RNU6-1038P-201ENST00000516516 104 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 HSPE1P4-201ENST00000550617 308 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC109446.1-201ENST00000566172 220 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC087683.1-201ENST00000591187 441 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC016925.2-201ENST00000605108 242 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AC139792.3-201ENST00000623525 224 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 AL450472.1-202ENST00000637286 180 ntBASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
POLR1EQ9GZS1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 MIR424-201ENST00000362227 98 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 Y_RNA.51-201ENST00000362725 102 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 SNORD114-6-201ENST00000364393 72 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 RNU6-438P-201ENST00000365561 103 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 RNA5SP219-201ENST00000390940 113 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 MTCO3P41-201ENST00000414801 328 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 RPL23AP95-201ENST00000426806 265 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 USP9YP14-201ENST00000430663 563 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AC130509.1-201ENST00000464158 433 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 RPL39P5-202ENST00000512505 151 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AC069113.1-201ENST00000517763 267 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AL118558.2-201ENST00000556294 238 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 VN1R80P-201ENST00000597126 338 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AC017083.3-201ENST00000609955 700 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 AC068792.1-201ENST00000621354 417 ntBASIC1.63□□□□□ -2.15
POLR1EQ9GZS1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms