Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AC026241.1-201ENST00000517873 2142 ntBASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
BHLHE41Q9C0J9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 RNU1-75P-201ENST00000347264 129 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 SNORA72.4-201ENST00000384174 132 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 RNU1-57P-201ENST00000384491 166 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-578P-201ENST00000390980 103 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 Y_RNA.586-201ENST00000391146 98 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 RNA5SP504-201ENST00000410676 117 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AL135790.2-201ENST00000437701 267 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AC112771.1-201ENST00000463581 102 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 RPS29P2-201ENST00000479278 136 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AC107027.2-201ENST00000512197 115 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AC026402.1-201ENST00000513642 170 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 MIR4431-201ENST00000579990 94 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 AC069528.2-201ENST00000624849 1991 ntBASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.81□□□□□ -1.8
BHLHE41Q9C0J9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-899P-201ENST00000363947 107 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 RNU4-10P-201ENST00000364383 140 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 Y_RNA.243-201ENST00000364481 109 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-735P-201ENST00000410612 107 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 HMGN2P20-201ENST00000437531 273 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 AC146507.2-201ENST00000460608 476 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 SRIP1-201ENST00000489235 288 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 MIR2116-201ENST00000517221 80 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 MIR548X2-201ENST00000579776 100 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 AL138880.2-201ENST00000616214 239 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 AL591424.2-201ENST00000617023 128 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.8□□□□□ -1.8
BHLHE41Q9C0J9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 U3.8-201ENST00000363675 217 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 SNORA70C-201ENST00000384538 135 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 MIR569-201ENST00000385228 96 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AC026726.1-201ENST00000512859 601 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 RNA5SP272-201ENST00000516095 111 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AC090616.3-201ENST00000582184 217 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AL391813.1-201ENST00000603098 260 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AL670379.2-201ENST00000604983 252 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 ARF4P1-201ENST00000605447 541 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 AC100821.1-201ENST00000523153 2479 ntBASIC3.79□□□□□ -1.8
BHLHE41Q9C0J9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-818P-201ENST00000364837 108 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 SNORA22C-201ENST00000384614 134 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 MIR626-201ENST00000385032 94 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 RNA5SP38-201ENST00000410750 119 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AL139281.1-201ENST00000422120 335 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AC083863.1-201ENST00000438811 231 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AC091153.1-201ENST00000466297 402 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 RPL36AP48-201ENST00000485521 314 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 SNORA31.9-201ENST00000516429 84 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 CYCSP29-201ENST00000533731 318 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 VN1R85P-201ENST00000601587 426 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AC008873.1-201ENST00000625051 138 ntBASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHE41Q9C0J9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms