Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR4315-2-201ENST00000640925 73 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 SNORD32B-201ENST00000364460 84 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 SNORD51.1-201ENST00000365405 77 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 SNORD116-13-201ENST00000384408 92 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 BX664727.1-201ENST00000416024 466 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 MTND2P9-201ENST00000422293 931 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AC002486.1-201ENST00000435098 391 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 MTND2P6-201ENST00000455337 1030 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AL049830.1-201ENST00000468034 425 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 HMGN1P12-201ENST00000499125 195 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 MTND2P33-201ENST00000506452 1031 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 RNU6-922P-201ENST00000516753 99 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AC011195.1-201ENST00000578177 177 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 MIR3136-201ENST00000583498 78 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AC007363.1-201ENST00000604736 620 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AL355816.2-201ENST00000610049 647 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 AC100810.6-201ENST00000638068 285 ntBASIC-0.17□□□□□ -2.44
SCAPERQ9BY12 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 RNU6-438P-201ENST00000365561 103 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 MIR301A-201ENST00000385261 86 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 RNU7-140P-201ENST00000459546 60 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 RNA5SP227-201ENST00000516184 113 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 RNU6-947P-201ENST00000516264 106 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 MIR5695-201ENST00000579717 85 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 AC097065.2-201ENST00000608159 533 ntBASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.18□□□□□ -2.44
SCAPERQ9BY12 AC092268.1-201ENST00000342691 405 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 RNU6-534P-201ENST00000364877 106 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 RNU6-514P-201ENST00000384208 107 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 MIR604-201ENST00000384880 94 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AL359634.1-202ENST00000404721 284 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AC104692.1-201ENST00000472406 90 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AC027338.1-201ENST00000514840 825 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AC106038.2-201ENST00000520706 568 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AC092325.1-201ENST00000566449 554 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 AC108676.2-201ENST00000605225 163 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 7SK.10-201ENST00000621414 298 ntBASIC-0.19□□□□□ -2.44
SCAPERQ9BY12 MIR101-1-201ENST00000362265 75 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 RNU4-73P-201ENST00000363164 141 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 RNU6-343P-201ENST00000364709 104 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 RNU6-793P-201ENST00000384233 104 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 MIR140-201ENST00000385282 100 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 RNU4-27P-201ENST00000410889 139 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AL359704.1-201ENST00000411586 781 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 C1DP2-201ENST00000418167 426 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AC003071.1-201ENST00000451219 789 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 C1DP4-201ENST00000455429 424 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AP001189.2-201ENST00000527320 189 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 MIR4742-201ENST00000581069 85 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 MIR4645-201ENST00000583158 77 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 AC253576.2-201ENST00000618815 580 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 MTND4P5-201ENST00000435821 1374 ntBASIC-0.2□□□□□ -2.44
SCAPERQ9BY12 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 U8.7-201ENST00000364940 136 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 HMGN2P22-201ENST00000427588 175 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 ELOCP30-201ENST00000447108 299 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 SNRPGP12-201ENST00000449481 213 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AC022364.2-201ENST00000457963 554 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 RNU6-353P-201ENST00000364266 108 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 SNORD114-9-201ENST00000364370 72 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 SNORA75.2-201ENST00000391138 150 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 SNORA75.3-201ENST00000391231 150 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 MTND1P22-201ENST00000510572 951 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AC138915.2-201ENST00000569776 97 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 uc_338.6-201ENST00000613544 171 ntBASIC-0.21□□□□□ -2.44
SCAPERQ9BY12 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms