Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 MIR449C-201ENST00000516047 92 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 Y_RNA.670-201ENST00000516255 105 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 SNORA25.17-201ENST00000517184 124 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 AL078603.1-201ENST00000603824 313 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 AC107304.1-201ENST00000604229 296 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 AL034555.1-201ENST00000604816 211 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 MIR6078-201ENST00000611069 100 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 SNORD32B-201ENST00000364460 84 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 RNU6-142P-201ENST00000384019 107 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 SNORA12-201ENST00000391162 147 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC092447.3-201ENST00000426027 686 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AL358934.1-201ENST00000432346 324 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC244670.1-201ENST00000436879 112 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 RNU6-333P-201ENST00000459117 107 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 RNA5SP57-201ENST00000459463 123 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC145146.1-201ENST00000496370 254 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC079140.5-201ENST00000507882 310 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 RNA5SP480-201ENST00000516840 109 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AP003033.1-201ENST00000527244 415 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 SUB1P2-201ENST00000556401 297 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 RSL24D1P11-201ENST00000591045 491 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 CYP2C61P-201ENST00000604072 290 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AP000654.2-201ENST00000605633 586 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC002044.1-201ENST00000606707 158 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AC136475.10-201ENST00000620253 385 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 SNORD98-201ENST00000636377 67 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 AP000560.1-201ENST00000624150 1937 ntBASIC1.63□□□□□ -2.15
RPAP1Q9BWH6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 RNU6-1120P-201ENST00000362988 108 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 RPS29P13-201ENST00000402041 169 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 RN7SKP142-201ENST00000411236 328 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 EIF4EP2-201ENST00000422816 654 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 BET1P1-201ENST00000482276 359 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 MTCO3P23-201ENST00000561363 289 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 AGGF1P4-201ENST00000568249 801 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 AL391840.1-201ENST00000571144 367 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 MIR3136-201ENST00000583498 78 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 VN1R107P-201ENST00000601784 209 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 AC068790.2-201ENST00000602601 557 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 OR4G1P-203ENST00000641984 1631 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 ZNF680P1-201ENST00000436625 1469 ntBASIC1.62□□□□□ -2.15
RPAP1Q9BWH6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 MIR613-201ENST00000385248 95 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 RNU6-903P-201ENST00000391270 109 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 MTND4P32-201ENST00000437189 1237 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 RPS4XP11-201ENST00000446897 772 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 HMGN2P18-201ENST00000450680 270 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC092436.3-201ENST00000511788 257 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 MTCO2P4-201ENST00000517968 247 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 COPS8P3-201ENST00000526024 482 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC084364.2-201ENST00000546924 395 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC022254.1-201ENST00000567857 235 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 MIR4528-201ENST00000577763 90 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 MIR4713-201ENST00000582691 75 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC008536.2-201ENST00000607284 349 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC109347.2-201ENST00000610220 349 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC073114.1-201ENST00000612027 490 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AP000770.2-201ENST00000623694 100 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 AC091895.1-201ENST00000624494 256 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 MTND4P14-201ENST00000435799 1354 ntBASIC1.61□□□□□ -2.15
RPAP1Q9BWH6 SNORD32A-201ENST00000364805 84 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 Y_RNA.399-201ENST00000383955 105 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 VN1R36P-201ENST00000414936 291 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 MTATP6P18-201ENST00000417994 673 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL117339.3-201ENST00000418733 162 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL590135.1-201ENST00000422215 156 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AC019205.3-201ENST00000424573 156 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AC078809.1-201ENST00000427601 140 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 USP9YP29-201ENST00000445112 563 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AC016700.2-201ENST00000446011 156 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL031274.1-201ENST00000450334 232 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL356010.1-201ENST00000456364 102 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 SNRPFP3-201ENST00000457792 225 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AC015911.1-201ENST00000495111 156 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms