Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 MIR448-201ENST00000362131 111 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 RNU6-117P-201ENST00000365415 107 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 RNU6-975P-201ENST00000384296 105 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 BX323845.1-201ENST00000432417 179 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 RPL30P14-201ENST00000482744 348 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 MIR4662B-201ENST00000579498 81 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 MIR4270-201ENST00000581799 70 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 AC008739.2-201ENST00000597006 317 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 AC091953.3-201ENST00000623220 236 ntBASIC4.31□□□□□ -1.72
USB1Q9BQ65 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USB1Q9BQ65 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.3□□□□□ -1.72
USB1Q9BQ65 RNA5SP307-201ENST00000362863 116 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 RNU6-198P-201ENST00000384258 104 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 SNORA70.10-201ENST00000384515 134 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 MIR585-201ENST00000384887 94 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 U3.32-201ENST00000408116 212 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.3□□□□□ -1.72
USB1Q9BQ65 AC016717.1-201ENST00000448918 286 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 AC245102.2-201ENST00000448956 180 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 RNU7-149P-201ENST00000516739 59 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 RNU6-762P-201ENST00000517107 102 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 MIR6820-201ENST00000611508 62 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 AC010680.1-201ENST00000590024 3590 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 AC058791.1-201ENST00000608412 3198 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 MFSD8-242ENST00000641690 4199 ntBASIC4.3□□□□□ -1.72
USB1Q9BQ65 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
USB1Q9BQ65 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.29□□□□□ -1.72
USB1Q9BQ65 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USB1Q9BQ65 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
USB1Q9BQ65 RNA5SP443-201ENST00000363083 132 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 Y_RNA.796-201ENST00000364268 102 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 Y_RNA.799-201ENST00000364992 102 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RNU6-49P-201ENST00000384256 107 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 MIR570-201ENST00000384917 97 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RNA5SP354-201ENST00000391247 136 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RNA5SP136-201ENST00000410906 107 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RN7SKP100-201ENST00000411258 284 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 AL590139.1-201ENST00000416267 400 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.29□□□□□ -1.72
USB1Q9BQ65 AC010099.1-201ENST00000455434 375 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RPL32P34-201ENST00000486380 400 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 OR9P1P-201ENST00000496431 281 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 MIR449C-201ENST00000516047 92 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RNU1-6P-201ENST00000516290 144 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 AC007751.1-201ENST00000529260 376 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.29□□□□□ -1.72
USB1Q9BQ65 SNORA74C-1-201ENST00000580726 201 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 MIR6780A-201ENST00000615089 68 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 AC006435.5-201ENST00000624486 112 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.29□□□□□ -1.72
USB1Q9BQ65 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USB1Q9BQ65 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USB1Q9BQ65 UBE3AP2-201ENST00000429033 2259 ntBASIC4.29□□□□□ -1.72
USB1Q9BQ65 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USB1Q9BQ65 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USB1Q9BQ65 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USB1Q9BQ65 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.28□□□□□ -1.72
USB1Q9BQ65 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
USB1Q9BQ65 RNU6-1209P-201ENST00000363655 107 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 RNU6-1138P-201ENST00000365359 106 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 Y_RNA.486-201ENST00000384398 107 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 Y_RNA.549-201ENST00000384657 102 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 MIR29B2-201ENST00000385055 81 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 RPL35AP21-201ENST00000437667 333 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 ATP5EP1-201ENST00000510257 156 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 SNORA40.13-201ENST00000516379 120 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 RNU6-365P-201ENST00000517113 106 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 AP000867.2-201ENST00000532468 320 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 AL121932.1-201ENST00000605542 214 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 AC096577.2-201ENST00000611455 153 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 AL596211.1-201ENST00000569873 2277 ntBASIC4.28□□□□□ -1.72
USB1Q9BQ65 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
USB1Q9BQ65 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USB1Q9BQ65 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.27□□□□□ -1.73
USB1Q9BQ65 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USB1Q9BQ65 MIR562-201ENST00000384894 95 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 MIR192-201ENST00000384915 110 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 AC002075.2-201ENST00000425207 252 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 CALM2P4-201ENST00000430810 426 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 RPS27P22-201ENST00000478056 241 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 RNU2-58P-201ENST00000516403 183 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 AC002064.3-201ENST00000623448 346 ntBASIC4.27□□□□□ -1.73
USB1Q9BQ65 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms