Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.05□□□□□ -1.92
SMOQ99835 AC016256.1-201ENST00000547971 354 ntBASIC3.05□□□□□ -1.92
SMOQ99835 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.05□□□□□ -1.92
SMOQ99835 RPS15AP11-201ENST00000594193 385 ntBASIC3.05□□□□□ -1.92
SMOQ99835 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.05□□□□□ -1.92
SMOQ99835 RMST_6.1-201ENST00000611980 203 ntBASIC3.05□□□□□ -1.92
SMOQ99835 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.05□□□□□ -1.92
SMOQ99835 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SMOQ99835 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
SMOQ99835 AP003122.5-201ENST00000527668 3766 ntBASIC3.05□□□□□ -1.92
SMOQ99835 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.04□□□□□ -1.92
SMOQ99835 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMOQ99835 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
SMOQ99835 Y_RNA.193-201ENST00000363979 102 ntBASIC3.04□□□□□ -1.92
SMOQ99835 U3.13-201ENST00000364804 214 ntBASIC3.04□□□□□ -1.92
SMOQ99835 U8.10-201ENST00000384260 133 ntBASIC3.04□□□□□ -1.92
SMOQ99835 RNU6-505P-201ENST00000384427 107 ntBASIC3.04□□□□□ -1.92
SMOQ99835 Y_RNA.500-201ENST00000384466 111 ntBASIC3.04□□□□□ -1.92
SMOQ99835 RPL21P1-201ENST00000399532 476 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.04□□□□□ -1.92
SMOQ99835 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.04□□□□□ -1.92
SMOQ99835 AP000705.1-201ENST00000454567 350 ntBASIC3.04□□□□□ -1.92
SMOQ99835 snoU13.6-201ENST00000458785 104 ntBASIC3.04□□□□□ -1.92
SMOQ99835 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.04□□□□□ -1.92
SMOQ99835 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.04□□□□□ -1.92
SMOQ99835 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.04□□□□□ -1.92
SMOQ99835 RNU6-397P-201ENST00000516226 104 ntBASIC3.04□□□□□ -1.92
SMOQ99835 SNORA31.16-201ENST00000516773 139 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AC090517.1-201ENST00000569307 266 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AC090617.3-201ENST00000573670 475 ntBASIC3.04□□□□□ -1.92
SMOQ99835 RPS29P30-201ENST00000600975 111 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AL078605.1-201ENST00000603529 500 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AC243829.7-201ENST00000633081 225 ntBASIC3.04□□□□□ -1.92
SMOQ99835 AC093831.2-201ENST00000624393 3427 ntBASIC3.04□□□□□ -1.92
SMOQ99835 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
SMOQ99835 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMOQ99835 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SMOQ99835 AC092268.1-201ENST00000342691 405 ntBASIC3.03□□□□□ -1.92
SMOQ99835 Y_RNA.152-201ENST00000363578 100 ntBASIC3.03□□□□□ -1.92
SMOQ99835 SNORA63.7-201ENST00000365579 123 ntBASIC3.03□□□□□ -1.92
SMOQ99835 Y_RNA.526-201ENST00000384572 110 ntBASIC3.03□□□□□ -1.92
SMOQ99835 MIR147B-201ENST00000390185 80 ntBASIC3.03□□□□□ -1.92
SMOQ99835 SNORA26.3-201ENST00000391119 136 ntBASIC3.03□□□□□ -1.92
SMOQ99835 ELOCP20-201ENST00000422460 345 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AC073910.1-201ENST00000445047 438 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AP001324.2-201ENST00000461163 319 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AP000870.1-201ENST00000472927 406 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AL049873.1-201ENST00000480540 376 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AC010469.2-201ENST00000496412 480 ntBASIC3.03□□□□□ -1.92
SMOQ99835 GZMAP1-201ENST00000503054 631 ntBASIC3.03□□□□□ -1.92
SMOQ99835 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.03□□□□□ -1.92
SMOQ99835 SNORD59.2-201ENST00000516873 68 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AP002770.2-201ENST00000543613 532 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AC107016.2-201ENST00000547968 190 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AL442163.3-201ENST00000554110 156 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.03□□□□□ -1.92
SMOQ99835 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.03□□□□□ -1.92
SMOQ99835 AL390123.1-201ENST00000603216 237 ntBASIC3.03□□□□□ -1.92
SMOQ99835 AL355877.2-201ENST00000603670 358 ntBASIC3.03□□□□□ -1.92
SMOQ99835 Z75746.1-201ENST00000440243 2080 ntBASIC3.03□□□□□ -1.92
SMOQ99835 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMOQ99835 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SMOQ99835 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.02□□□□□ -1.93
SMOQ99835 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.02□□□□□ -1.93
SMOQ99835 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.02□□□□□ -1.93
SMOQ99835 Y_RNA.26-201ENST00000362539 101 ntBASIC3.02□□□□□ -1.93
SMOQ99835 Y_RNA.27-201ENST00000362540 103 ntBASIC3.02□□□□□ -1.93
SMOQ99835 Y_RNA.40-201ENST00000362645 93 ntBASIC3.02□□□□□ -1.93
SMOQ99835 RNU6-529P-201ENST00000363383 104 ntBASIC3.02□□□□□ -1.93
SMOQ99835 Y_RNA.214-201ENST00000364201 112 ntBASIC3.02□□□□□ -1.93
SMOQ99835 RNU4-50P-201ENST00000364361 141 ntBASIC3.02□□□□□ -1.93
SMOQ99835 Y_RNA.471-201ENST00000384312 102 ntBASIC3.02□□□□□ -1.93
SMOQ99835 MIR153-2-201ENST00000385225 87 ntBASIC3.02□□□□□ -1.93
SMOQ99835 AC009414.1-201ENST00000427200 443 ntBASIC3.02□□□□□ -1.93
SMOQ99835 DYNLT3P2-201ENST00000442517 295 ntBASIC3.02□□□□□ -1.93
SMOQ99835 OSTCP8-201ENST00000445117 448 ntBASIC3.02□□□□□ -1.93
SMOQ99835 FCF1P4-201ENST00000448326 183 ntBASIC3.02□□□□□ -1.93
SMOQ99835 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.02□□□□□ -1.93
SMOQ99835 RPS27P29-201ENST00000463110 252 ntBASIC3.02□□□□□ -1.93
SMOQ99835 RPS27P26-201ENST00000494583 239 ntBASIC3.02□□□□□ -1.93
SMOQ99835 AC034114.1-201ENST00000520293 285 ntBASIC3.02□□□□□ -1.93
SMOQ99835 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.02□□□□□ -1.93
SMOQ99835 AC027288.2-201ENST00000553028 243 ntBASIC3.02□□□□□ -1.93
SMOQ99835 AL161670.1-201ENST00000554348 137 ntBASIC3.02□□□□□ -1.93
SMOQ99835 AC021231.3-201ENST00000558497 370 ntBASIC3.02□□□□□ -1.93
SMOQ99835 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.02□□□□□ -1.93
SMOQ99835 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.02□□□□□ -1.93
SMOQ99835 RNU6-91P-201ENST00000607774 107 ntBASIC3.02□□□□□ -1.93
SMOQ99835 U4.1-201ENST00000620349 87 ntBASIC3.02□□□□□ -1.93
SMOQ99835 MIR6852-201ENST00000621699 66 ntBASIC3.02□□□□□ -1.93
SMOQ99835 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMOQ99835 AC002543.1-201ENST00000299783 1954 ntBASIC3.01□□□□□ -1.93
SMOQ99835 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.01□□□□□ -1.93
SMOQ99835 RNU1-35P-201ENST00000362782 153 ntBASIC3.01□□□□□ -1.93
SMOQ99835 Y_RNA.222-201ENST00000364264 102 ntBASIC3.01□□□□□ -1.93
SMOQ99835 RNU6-806P-201ENST00000365147 105 ntBASIC3.01□□□□□ -1.93
SMOQ99835 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.01□□□□□ -1.93
SMOQ99835 MIR767-201ENST00000390228 109 ntBASIC3.01□□□□□ -1.93
SMOQ99835 MIR1302-3-201ENST00000408128 138 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms