Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNA5SP274-201ENST00000410484 108 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.08□□□□□ -2.08
LITAFQ99732 AC097463.2-201ENST00000421074 142 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
LITAFQ99732 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.08□□□□□ -2.08
LITAFQ99732 AC112220.1-201ENST00000434628 355 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.08□□□□□ -2.08
LITAFQ99732 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.08□□□□□ -2.08
LITAFQ99732 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.08□□□□□ -2.08
LITAFQ99732 SNORD127-201ENST00000458892 86 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 SCARNA17.1-201ENST00000516211 143 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 RNU2-53P-201ENST00000516257 147 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 SCARNA17.2-201ENST00000516334 143 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.08□□□□□ -2.08
LITAFQ99732 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.08□□□□□ -2.08
LITAFQ99732 MIR4300-201ENST00000581016 96 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 AC011471.1-201ENST00000585766 187 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 AL356575.1-201ENST00000603008 283 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 AL162713.1-201ENST00000604480 262 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 MIR7851-201ENST00000610611 160 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 PCGEM1.1-201ENST00000613431 131 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.08□□□□□ -2.08
LITAFQ99732 SCARNA17.4-201ENST00000614296 143 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.08□□□□□ -2.08
LITAFQ99732 U6.104-201ENST00000637979 90 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LITAFQ99732 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LITAFQ99732 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LITAFQ99732 AC010615.1-201ENST00000594254 1764 ntBASIC2.08□□□□□ -2.08
LITAFQ99732 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LITAFQ99732 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
LITAFQ99732 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
LITAFQ99732 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 Y_RNA.84-201ENST00000363011 104 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 snoU2_19.2-201ENST00000363024 80 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 RNU6-937P-201ENST00000384325 106 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 U8.11-201ENST00000384699 133 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 U8.12-201ENST00000384701 133 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.07□□□□□ -2.08
LITAFQ99732 AC010095.1-201ENST00000443543 144 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 RPS3P1-201ENST00000456781 192 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 RNU6-1132P-201ENST00000459214 107 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 U8.18-201ENST00000459285 133 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.07□□□□□ -2.08
LITAFQ99732 TRBVB-201ENST00000477100 408 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 RPL26P26-201ENST00000480251 434 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 SNORA25.14-201ENST00000516481 132 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.07□□□□□ -2.08
LITAFQ99732 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.07□□□□□ -2.08
LITAFQ99732 MIR2682-201ENST00000580305 110 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.07□□□□□ -2.08
LITAFQ99732 MIR4765-201ENST00000585007 77 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 AC004832.5-201ENST00000608677 401 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 AC010999.1-201ENST00000611856 324 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 MIR6729-201ENST00000618194 65 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.07□□□□□ -2.08
LITAFQ99732 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.07□□□□□ -2.08
LITAFQ99732 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.07□□□□□ -2.08
LITAFQ99732 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LITAFQ99732 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.06□□□□□ -2.08
LITAFQ99732 AP003122.5-201ENST00000527668 3766 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 snoU2_19.1-201ENST00000362361 80 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RNU5F-3P-201ENST00000363767 117 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RNU6-1083P-201ENST00000384022 107 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 Y_RNA.476-201ENST00000384347 108 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 Y_RNA.518-201ENST00000384552 113 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RNU6-1203P-201ENST00000410703 110 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RNU2-38P-201ENST00000410856 79 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RNU2-25P-201ENST00000411041 191 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.06□□□□□ -2.08
LITAFQ99732 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.06□□□□□ -2.08
LITAFQ99732 EIF4EP4-201ENST00000424916 578 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AC108059.2-201ENST00000434626 151 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.06□□□□□ -2.08
LITAFQ99732 RBMY2UP-201ENST00000453474 324 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RPL31P41-201ENST00000477967 372 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AC103975.1-201ENST00000482506 483 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 RN7SL297P-201ENST00000483161 293 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AC145146.1-201ENST00000496370 254 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.06□□□□□ -2.08
LITAFQ99732 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.06□□□□□ -2.08
LITAFQ99732 EIF4A1P12-201ENST00000551910 141 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LITAFQ99732 AC090425.1-201ENST00000610007 140 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 AL357075.2-201ENST00000614906 189 ntBASIC2.06□□□□□ -2.08
LITAFQ99732 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.06□□□□□ -2.08
LITAFQ99732 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.06□□□□□ -2.08
LITAFQ99732 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LITAFQ99732 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LITAFQ99732 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LITAFQ99732 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LITAFQ99732 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LITAFQ99732 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms