Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 RNY3P3-201ENST00000363816 102 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 RNU6-438P-201ENST00000365561 103 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 MIR521-1-201ENST00000384902 87 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 RNA5SP501-201ENST00000410990 112 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AL030996.1-201ENST00000411430 235 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 UBE2V1P4-201ENST00000425374 344 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 MTND2P29-201ENST00000438595 412 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 RNU7-14P-201ENST00000459331 62 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AC026371.1-201ENST00000551867 419 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 ZNF519P2-201ENST00000557032 169 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 CYP2C61P-201ENST00000604072 290 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 KPNA2P1-201ENST00000458289 1591 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 AL136360.1-201ENST00000503377 1900 ntBASIC2.05□□□□□ -2.08
RAB3IPQ96QF0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 RNU6-254P-201ENST00000363377 107 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 SNORD114-6-201ENST00000364393 72 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 SNORA29-201ENST00000384183 140 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 RNU6-933P-201ENST00000384424 107 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC114801.2-201ENST00000503825 781 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 MTND1P35-201ENST00000526739 508 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 MRPS36P4-201ENST00000534436 298 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC016957.1-201ENST00000534895 309 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 MIR4513-201ENST00000581077 86 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC100830.2-201ENST00000581636 240 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC146944.4-201ENST00000602697 718 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC005034.5-201ENST00000604219 466 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC064807.4-201ENST00000607201 407 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC104458.1-201ENST00000608243 463 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AL136221.1-201ENST00000621449 509 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
RAB3IPQ96QF0 U3.12-201ENST00000364498 214 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 Y_RNA.256-201ENST00000364594 104 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 SNORA8-201ENST00000384574 139 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 C8orf59P1-201ENST00000429930 303 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 MTND3P21-201ENST00000433774 331 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 NDUFA5P4-201ENST00000436704 385 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 HMGN2P26-201ENST00000463169 339 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 TOMM22P6-201ENST00000465035 409 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 MTCO1P29-201ENST00000496868 288 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC234781.5-201ENST00000508429 271 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC109635.3-201ENST00000529536 185 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC009994.1-201ENST00000606889 253 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC005858.4-201ENST00000623191 700 ntBASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RAB3IPQ96QF0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
RAB3IPQ96QF0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
RAB3IPQ96QF0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
RAB3IPQ96QF0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 Y_RNA.3-201ENST00000362331 103 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 Y_RNA.554-201ENST00000384672 102 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 MIR181A1-201ENST00000385026 110 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 RNU6-332P-201ENST00000391193 108 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 RNA5SP494-201ENST00000410653 129 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 AC123900.1-201ENST00000420390 96 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 USP9YP28-201ENST00000435142 589 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 AC007547.1-201ENST00000462177 490 ntBASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB3IPQ96QF0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms