Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AC002486.1-201ENST00000435098 391 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 RPEP5-201ENST00000441137 268 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AC233266.1-201ENST00000454518 96 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.19□□□□□ -2.38
CCDC115Q96NT0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.19□□□□□ -2.38
CCDC115Q96NT0 MIR5695-201ENST00000579717 85 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AC110760.3-201ENST00000598794 467 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AL360219.1-201ENST00000610230 366 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AC242852.1-201ENST00000612151 96 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 RMST_7.1-201ENST00000621935 268 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AC244015.1-201ENST00000622301 99 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 Z69720.2-201ENST00000624755 279 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 SNORD98-201ENST00000636377 67 ntBASIC0.19□□□□□ -2.38
CCDC115Q96NT0 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 RNU6-342P-201ENST00000384521 104 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 RNA5SP511-201ENST00000410487 115 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC073614.1-201ENST00000438690 650 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 RNU7-90P-201ENST00000459216 62 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC022493.2-201ENST00000506122 481 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC010587.2-201ENST00000511727 448 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC011406.1-201ENST00000512440 370 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 OR8K2P-201ENST00000524645 927 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC090888.2-201ENST00000559765 1144 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 KC877982.1-201ENST00000602313 470 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC104073.3-201ENST00000610942 955 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC093913.1-201ENST00000614178 329 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC026585.1-201ENST00000619582 524 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC131159.1-201ENST00000621854 213 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 AC010487.4-201ENST00000637027 61 ntBASIC0.18□□□□□ -2.38
CCDC115Q96NT0 RNU6-946P-201ENST00000383878 107 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 RNU6-163P-201ENST00000384396 106 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 MIR489-201ENST00000384923 84 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AL603865.2-201ENST00000401679 213 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 ELOCP17-201ENST00000414751 326 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 VPS26BP1-201ENST00000417155 755 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC060773.1-201ENST00000421698 310 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 RSL24D1P8-201ENST00000434442 492 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.17□□□□□ -2.38
CCDC115Q96NT0 RNU7-21P-201ENST00000459430 62 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.17□□□□□ -2.38
CCDC115Q96NT0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CCDC115Q96NT0 RNU5F-4P-201ENST00000516581 114 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC011979.2-201ENST00000527568 352 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC021231.3-201ENST00000558497 370 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC025627.3-201ENST00000582078 182 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 RN7SL793P-201ENST00000583259 296 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.17□□□□□ -2.38
CCDC115Q96NT0 MIR548AC-201ENST00000585049 88 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 CTHRC1P1-201ENST00000605383 469 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC116165.2-201ENST00000616705 206 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC009509.4-201ENST00000619202 509 ntBASIC0.17□□□□□ -2.38
CCDC115Q96NT0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.17□□□□□ -2.38
CCDC115Q96NT0 RNU6-78P-201ENST00000362897 107 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 Y_RNA.132-201ENST00000363421 102 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU4-56P-201ENST00000364700 142 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU6-384P-201ENST00000364900 104 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 Y_RNA.393-201ENST00000383936 102 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU6-1026P-201ENST00000384465 108 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 SNORA16.2-201ENST00000390991 127 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU1-119P-201ENST00000391122 165 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU2-62P-201ENST00000410868 191 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.16□□□□□ -2.38
CCDC115Q96NT0 NFU1P2-201ENST00000448700 469 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.16□□□□□ -2.38
CCDC115Q96NT0 SRRM1P2-201ENST00000464531 1192 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNA5SP216-201ENST00000516111 123 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU6-1098P-201ENST00000516772 96 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.16□□□□□ -2.38
CCDC115Q96NT0 TPRKBP2-201ENST00000565969 475 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AL929325.1-201ENST00000603096 117 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AC012507.3-201ENST00000603556 477 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RPL17P51-201ENST00000605218 238 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AC092106.3-201ENST00000611308 722 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 AL354696.1-201ENST00000614652 497 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.16□□□□□ -2.38
CCDC115Q96NT0 MIR338-201ENST00000636369 67 ntBASIC0.16□□□□□ -2.38
CCDC115Q96NT0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 RNU6-877P-201ENST00000383868 107 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 RNU6-505P-201ENST00000384427 107 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 RNY1P4-201ENST00000384595 115 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 MIR613-201ENST00000385248 95 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 SNORD99-201ENST00000408612 74 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.15□□□□□ -2.39
CCDC115Q96NT0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.15□□□□□ -2.39
CCDC115Q96NT0 AC113347.3-201ENST00000509113 148 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 AC027338.1-201ENST00000514840 825 ntBASIC0.15□□□□□ -2.39
CCDC115Q96NT0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.15□□□□□ -2.39
CCDC115Q96NT0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms