Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 FTH1P15-201ENST00000406984 280 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 USP9YP16-201ENST00000430287 407 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 USP9YP23-201ENST00000455085 407 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 SNORD109B-201ENST00000458961 67 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 SNORD109A-201ENST00000459128 67 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 U8.22-201ENST00000459141 133 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 RN7SKP210-201ENST00000459176 261 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 TOMM22P6-201ENST00000465035 409 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 ELOCP29-201ENST00000588193 334 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 AC125232.2-201ENST00000592457 143 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 RPS29P30-201ENST00000600975 111 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 HSPE1P7-201ENST00000604681 321 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.12□□□□□ -1.91
PGBD1Q96JS3 AL159153.1-201ENST00000619688 317 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 MIR8062-201ENST00000621515 85 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 MAPK10-322ENST00000641485 4530 ntBASIC3.12□□□□□ -1.91
PGBD1Q96JS3 AC022336.2-201ENST00000568966 2538 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 RNU6-907P-201ENST00000390924 102 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 AC124916.1-201ENST00000444020 547 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 AC073910.1-201ENST00000445047 438 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.11□□□□□ -1.91
PGBD1Q96JS3 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 SNRPGP7-201ENST00000469016 106 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 SNORA25.11-201ENST00000515935 105 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 RNU6-897P-201ENST00000517135 105 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.11□□□□□ -1.91
PGBD1Q96JS3 AC109329.1-201ENST00000518744 317 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.11□□□□□ -1.91
PGBD1Q96JS3 AC010928.2-201ENST00000588017 287 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 CUL1P1-201ENST00000509510 2425 ntBASIC3.11□□□□□ -1.91
PGBD1Q96JS3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PGBD1Q96JS3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
PGBD1Q96JS3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RNU4-50P-201ENST00000364361 141 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.307-201ENST00000365022 117 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RNU6-472P-201ENST00000384299 107 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 MIR634-201ENST00000385208 97 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RPS4XP3-201ENST00000398541 413 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 MTCO3P19-201ENST00000415864 321 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AL513124.1-201ENST00000450410 614 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AC006026.2-201ENST00000457376 180 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 snoU13.28-201ENST00000459235 104 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 MRPL42P6-201ENST00000486397 371 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RPL30P1-201ENST00000488676 339 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.1□□□□□ -1.91
PGBD1Q96JS3 RNU7-175P-201ENST00000515915 61 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AC104581.2-201ENST00000572227 430 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AL390123.1-201ENST00000603216 237 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AC068831.7-201ENST00000616954 363 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 MIR6852-201ENST00000621699 66 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AC073308.1-201ENST00000623696 305 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PGBD1Q96JS3 AC233981.2-201ENST00000611524 1614 ntBASIC3.1□□□□□ -1.91
PGBD1Q96JS3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PGBD1Q96JS3 Z75746.1-201ENST00000440243 2080 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC062016.1-201ENST00000355719 319 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.556-201ENST00000384677 113 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 RNU6-713P-201ENST00000384761 107 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 MT-TW-201ENST00000387382 68 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 MT-TG-201ENST00000387429 68 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 RNU6-130P-201ENST00000411112 103 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC074117.2-201ENST00000417130 397 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 BPY2DP-201ENST00000422208 265 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 RPL23AP75-201ENST00000491601 451 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 RNU6-911P-201ENST00000516523 104 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 MIR3668-201ENST00000582138 75 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 RPL23AP78-201ENST00000599928 470 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 AC062037.2-201ENST00000610137 73 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.09□□□□□ -1.91
PGBD1Q96JS3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PGBD1Q96JS3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PGBD1Q96JS3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms