Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
VMP1Q96GC9 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 MIR340-201ENST00000362125 95 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 Y_RNA.77-201ENST00000362962 107 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 Y_RNA.381-201ENST00000365666 102 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 SNORD37.1-201ENST00000390968 65 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 SNORA12.2-201ENST00000391040 156 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
VMP1Q96GC9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.89□□□□□ -2.11
VMP1Q96GC9 TPTE2P5-203ENST00000458118 728 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 snoU13.15-201ENST00000459407 104 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.89□□□□□ -2.11
VMP1Q96GC9 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 AC108078.1-201ENST00000508073 725 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 RNU6-189P-201ENST00000516120 101 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 SNORA31.17-201ENST00000516953 127 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 SUMO2P18-201ENST00000518873 252 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 MIR5094-201ENST00000578766 85 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.89□□□□□ -2.11
VMP1Q96GC9 AC009994.1-201ENST00000606889 253 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.89□□□□□ -2.11
VMP1Q96GC9 AC022513.1-201ENST00000624512 117 ntBASIC1.89□□□□□ -2.11
VMP1Q96GC9 MIR126-201ENST00000362291 85 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 RNU6-82P-201ENST00000363970 107 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VMP1Q96GC9 RNU6-1093P-201ENST00000391194 107 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
VMP1Q96GC9 MTCO3P38-201ENST00000468910 766 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC010424.1-201ENST00000506336 297 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.88□□□□□ -2.11
VMP1Q96GC9 RNU6-612P-201ENST00000516909 102 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC087854.1-201ENST00000519706 414 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC006362.1-201ENST00000567392 174 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC016925.2-201ENST00000605108 242 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 AC022079.1-201ENST00000621546 602 ntBASIC1.88□□□□□ -2.11
VMP1Q96GC9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VMP1Q96GC9 MTND5P9-201ENST00000503854 1755 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VMP1Q96GC9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 MIR424-201ENST00000362227 98 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 Y_RNA.582-201ENST00000391023 95 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 RNU4-55P-201ENST00000410731 137 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 CDK8P2-201ENST00000415020 547 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC010095.1-201ENST00000443543 144 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC007395.1-201ENST00000451333 677 ntBASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
VMP1Q96GC9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 RNU6-227P-201ENST00000362865 103 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 Y_RNA.132-201ENST00000363421 102 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 RNU6-112P-201ENST00000363599 104 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 EIF1AXP1-201ENST00000419267 435 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC027124.2-201ENST00000428249 105 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 HMGB1P18-201ENST00000438801 619 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VMP1Q96GC9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC016925.1-201ENST00000458303 298 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 RPL39P5-202ENST00000512505 151 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 SNORA40.12-201ENST00000516329 111 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 Y_RNA.688-201ENST00000516565 95 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.86□□□□□ -2.11
VMP1Q96GC9 AP003034.1-201ENST00000534621 422 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC016256.1-201ENST00000547971 354 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC017083.3-201ENST00000609955 700 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC103705.1-201ENST00000619013 241 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AC090582.1-201ENST00000636321 199 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 AL159152.1-201ENST00000635019 2587 ntBASIC1.86□□□□□ -2.11
VMP1Q96GC9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VMP1Q96GC9 RNU6-439P-201ENST00000384188 106 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 RNU2-2P-201ENST00000410396 191 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 RPL21P111-201ENST00000418453 477 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.85□□□□□ -2.11
VMP1Q96GC9 AC087477.1-201ENST00000465747 340 ntBASIC1.85□□□□□ -2.11
VMP1Q96GC9 UBL5P3-201ENST00000475112 231 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms