Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC098862.1-201ENST00000504991 413 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC079140.5-201ENST00000507882 310 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 MIR3923-201ENST00000579521 83 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 MIR4422-201ENST00000581938 83 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC078795.3-201ENST00000602913 472 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC016727.1-205ENST00000605437 569 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC002044.1-201ENST00000606707 158 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC091304.6-201ENST00000619761 202 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC009161.2-201ENST00000624626 138 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 RNU6-181P-201ENST00000363225 107 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 MT-TH-201ENST00000387441 69 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC004965.1-201ENST00000413033 213 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 RPL23AP36-201ENST00000413895 458 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 C8orf59P1-201ENST00000429930 303 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AL031667.1-201ENST00000440222 725 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 SCARNA18-201ENST00000459004 134 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 RNU6-445P-201ENST00000516949 107 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AP003034.1-201ENST00000534621 422 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC084364.2-201ENST00000546924 395 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 HSPE1P4-201ENST00000550617 308 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 Z84480.1-201ENST00000605131 311 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC005520.5-201ENST00000613926 164 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AC120349.3-201ENST00000624377 529 ntBASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.32□□□□□ -2.2
ECHDC3Q96DC8 RNU6-266P-201ENST00000364225 107 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 RNU2-41P-201ENST00000410991 178 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 MTCO3P41-201ENST00000414801 328 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 UBE2V1P8-201ENST00000437166 265 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 TOMM22P6-201ENST00000465035 409 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AL163540.1-201ENST00000485382 386 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC097473.1-201ENST00000508142 408 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC109446.1-201ENST00000566172 220 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC023043.2-201ENST00000589678 1026 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 AC107304.1-201ENST00000604229 296 ntBASIC1.31□□□□□ -2.2
ECHDC3Q96DC8 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 MIR302D-201ENST00000362275 68 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 RNU1-76P-201ENST00000362903 159 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 U3.9-201ENST00000363823 204 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 RNU4-56P-201ENST00000364700 142 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNORD31B-201ENST00000364977 69 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNORA32.2-201ENST00000384049 122 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNORA26.8-201ENST00000391306 124 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 RNU2-29P-201ENST00000410423 189 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 BX295541.1-201ENST00000417774 250 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNRPEP8-201ENST00000442866 260 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC132479.1-201ENST00000449160 144 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 SNRPGP9-201ENST00000456025 225 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC016925.1-201ENST00000458303 298 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC091874.1-201ENST00000511402 339 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 EIF4A1P12-201ENST00000551910 141 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC103996.1-201ENST00000555468 102 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 MIR3941-201ENST00000582572 103 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 MIR4760-201ENST00000585040 80 ntBASIC1.3□□□□□ -2.2
ECHDC3Q96DC8 RSL24D1P11-201ENST00000591045 491 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms