Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 RPL9P9-202ENST00000466501 579 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 PTP4A1P4-201ENST00000512479 322 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 MTND1P5-201ENST00000517906 940 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
LHX4Q969G2 MIR3923-201ENST00000579521 83 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 AL359314.1-201ENST00000616913 261 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 AL160394.1-201ENST00000624765 724 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 AC068137.4-201ENST00000638485 296 ntBASIC1.81□□□□□ -2.12
LHX4Q969G2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.81□□□□□ -2.12
LHX4Q969G2 AC009541.1-201ENST00000438279 2662 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 Y_RNA.373-201ENST00000365600 103 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 RNU4-52P-201ENST00000384209 138 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 SNORD14D-201ENST00000384390 87 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LHX4Q969G2 RN7SKP32-201ENST00000410167 303 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.8□□□□□ -2.12
LHX4Q969G2 MTND3P9-201ENST00000429526 346 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.8□□□□□ -2.12
LHX4Q969G2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.8□□□□□ -2.12
LHX4Q969G2 AC104564.1-201ENST00000493028 407 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.8□□□□□ -2.12
LHX4Q969G2 MIR449C-201ENST00000516047 92 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 RNU6-567P-201ENST00000516746 107 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.8□□□□□ -2.12
LHX4Q969G2 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.8□□□□□ -2.12
LHX4Q969G2 AP000654.2-201ENST00000605633 586 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 PCGEM1.1-201ENST00000613431 131 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
LHX4Q969G2 AC009831.4-201ENST00000620744 325 ntBASIC1.8□□□□□ -2.12
LHX4Q969G2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LHX4Q969G2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LHX4Q969G2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
LHX4Q969G2 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 SNORD115-3-201ENST00000363100 82 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 SNORD113-7-201ENST00000363762 77 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 RNU4-12P-201ENST00000365233 139 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 RNU6-128P-201ENST00000383976 107 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 Y_RNA.530-201ENST00000384587 101 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 MIR29C-201ENST00000385231 88 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 SNORA48.3-201ENST00000391081 134 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 RNU6-332P-201ENST00000391193 108 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 RNU6-325P-201ENST00000411132 105 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.79□□□□□ -2.12
LHX4Q969G2 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 AC021146.2-201ENST00000504736 556 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.79□□□□□ -2.12
LHX4Q969G2 AC093259.1-201ENST00000509755 300 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 RNU6-991P-201ENST00000516168 107 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 RNA5SP200-201ENST00000516360 103 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 AC016256.1-201ENST00000547971 354 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.79□□□□□ -2.12
LHX4Q969G2 CYP4A27P-201ENST00000567218 190 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.79□□□□□ -2.12
LHX4Q969G2 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 AP000553.5-201ENST00000641933 54 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
LHX4Q969G2 AC009487.4-201ENST00000624969 3585 ntBASIC1.79□□□□□ -2.12
LHX4Q969G2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.78□□□□□ -2.12
LHX4Q969G2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LHX4Q969G2 Y_RNA.89-201ENST00000363031 102 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 U3.9-201ENST00000363823 204 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 RNU6-534P-201ENST00000364877 106 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LHX4Q969G2 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 MIR1283-2-201ENST00000408621 87 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AL030996.1-201ENST00000411430 235 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 EIF1AXP1-201ENST00000419267 435 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 USP9YP28-201ENST00000435142 589 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 MTND1P34-201ENST00000438556 671 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 MTND2P29-201ENST00000438595 412 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC245102.2-201ENST00000448956 180 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.78□□□□□ -2.12
LHX4Q969G2 AC132942.1-201ENST00000486753 483 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 MTCO1P29-201ENST00000496868 288 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 TRBVA-201ENST00000498804 316 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 YWHAEP4-201ENST00000505390 198 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 FAM206BP-201ENST00000510179 541 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.78□□□□□ -2.12
LHX4Q969G2 AC026371.1-201ENST00000551867 419 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 CPDP1-201ENST00000579660 283 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC005520.5-201ENST00000613926 164 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC090517.2-201ENST00000614966 680 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC005296.1-201ENST00000616145 209 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 AC139792.2-201ENST00000624218 587 ntBASIC1.78□□□□□ -2.12
LHX4Q969G2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LHX4Q969G2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.78□□□□□ -2.12
LHX4Q969G2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.13
LHX4Q969G2 RNU6-1252P-201ENST00000363054 104 ntBASIC1.77□□□□□ -2.13
LHX4Q969G2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.77□□□□□ -2.13
LHX4Q969G2 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
LHX4Q969G2 RNU6-234P-201ENST00000365229 104 ntBASIC1.77□□□□□ -2.13
LHX4Q969G2 RNU6-26P-201ENST00000383985 107 ntBASIC1.77□□□□□ -2.13
LHX4Q969G2 RNU6-378P-201ENST00000384324 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms