Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC069294.1-201ENST00000608397 350 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 MIR5701-2-201ENST00000615634 82 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HPS3Q969F9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS3Q969F9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.11□□□□□ -1.91
HPS3Q969F9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HPS3Q969F9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS3Q969F9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
HPS3Q969F9 AC026241.1-201ENST00000517873 2142 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 XGY1-201ENST00000381172 446 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 SNORA36A-201ENST00000384221 132 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 MIR625-201ENST00000385047 85 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 RPL30P4-201ENST00000429309 333 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS3Q969F9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.1□□□□□ -1.91
HPS3Q969F9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.1□□□□□ -1.91
HPS3Q969F9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.1□□□□□ -1.91
HPS3Q969F9 RPS3P1-201ENST00000456781 192 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS3Q969F9 AC140059.1-201ENST00000489238 361 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 Y_RNA.661-201ENST00000516003 99 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 RNU6-120P-201ENST00000516077 103 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 Y_RNA.706-201ENST00000516933 99 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 SNORD116.3-201ENST00000517176 78 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 AC023442.1-201ENST00000531247 422 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 CYP4A27P-201ENST00000567218 190 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.1□□□□□ -1.91
HPS3Q969F9 Z98751.3-201ENST00000604447 521 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 RMST_6.1-201ENST00000611980 203 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 AL450472.1-202ENST00000637286 180 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 AC080128.1-201ENST00000474389 1917 ntBASIC3.1□□□□□ -1.91
HPS3Q969F9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HPS3Q969F9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS3Q969F9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HPS3Q969F9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.112-201ENST00000363250 102 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.138-201ENST00000363462 102 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 SNORD115-32-201ENST00000364079 82 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.252-201ENST00000364556 101 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.405-201ENST00000383979 100 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.451-201ENST00000384200 100 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.524-201ENST00000384564 100 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 Y_RNA.561-201ENST00000384694 100 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 SNORA12.2-201ENST00000391040 156 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 MIR548P-201ENST00000408336 84 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 RNU6-1156P-201ENST00000410365 100 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 AC092423.1-201ENST00000430165 186 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 RPS15AP7-201ENST00000439294 405 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.09□□□□□ -1.91
HPS3Q969F9 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.09□□□□□ -1.91
HPS3Q969F9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
HPS3Q969F9 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 AC023141.11-201ENST00000508864 202 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 RNU7-4P-201ENST00000516961 62 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 AC105245.1-201ENST00000581934 244 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS3Q969F9 uc_338.22-201ENST00000622722 187 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS3Q969F9 AL137790.1-201ENST00000634283 177 ntBASIC3.09□□□□□ -1.91
HPS3Q969F9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HPS3Q969F9 MTND4P27-201ENST00000450813 1354 ntBASIC3.09□□□□□ -1.92
HPS3Q969F9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
HPS3Q969F9 AC108206.1-201ENST00000570186 4159 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
HPS3Q969F9 RNU1-112P-201ENST00000364401 164 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 MIR32-201ENST00000384965 70 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 MIR153-2-201ENST00000385225 87 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.08□□□□□ -1.92
HPS3Q969F9 AC080013.2-201ENST00000460866 323 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AF186996.7-201ENST00000492781 209 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.08□□□□□ -1.92
HPS3Q969F9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 ZNF861P-201ENST00000588126 639 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AL078605.1-201ENST00000603529 500 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AC006023.1-201ENST00000603944 259 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AL033523.1-201ENST00000605153 153 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.08□□□□□ -1.92
HPS3Q969F9 AC107871.2-201ENST00000612894 502 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HPS3Q969F9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HPS3Q969F9 AC096644.4-201ENST00000563417 2912 ntBASIC3.08□□□□□ -1.92
HPS3Q969F9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS3Q969F9 Y_RNA.5-201ENST00000362334 102 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 SNORA63-201ENST00000363450 132 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 Y_RNA.314-201ENST00000365114 102 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 RNU1-109P-201ENST00000383960 147 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 RNU6-474P-201ENST00000384243 107 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 MIR29B2-201ENST00000385055 81 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 SNORD88.1-201ENST00000408684 91 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 Z82188.1-201ENST00000436709 154 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.07□□□□□ -1.92
HPS3Q969F9 AL137792.2-201ENST00000443484 235 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 AL035666.1-201ENST00000446195 348 ntBASIC3.07□□□□□ -1.92
HPS3Q969F9 OR2AQ1P-201ENST00000451972 200 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms