Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.46□□□□□ -1.86
ERCC4Q92889 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.46□□□□□ -1.86
ERCC4Q92889 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.46□□□□□ -1.86
ERCC4Q92889 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.46□□□□□ -1.86
ERCC4Q92889 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.46□□□□□ -1.86
ERCC4Q92889 AC087477.1-201ENST00000465747 340 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 RN7SL499P-201ENST00000481141 276 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.46□□□□□ -1.86
ERCC4Q92889 RNU6-397P-201ENST00000516226 104 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ERCC4Q92889 AC007375.1-201ENST00000554513 578 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 AC091152.3-201ENST00000604227 325 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 AC007318.2-201ENST00000620999 243 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.45□□□□□ -1.86
ERCC4Q92889 RBBP8P1-201ENST00000449447 1844 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 OR56A5-201ENST00000340110 738 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 RNU6-379P-201ENST00000363813 104 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 Y_RNA.288-201ENST00000364854 92 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.45□□□□□ -1.86
ERCC4Q92889 Y_RNA.461-201ENST00000384263 103 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 Y_RNA.476-201ENST00000384347 108 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 EIF1P2-201ENST00000428233 350 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 AC005326.1-201ENST00000429197 123 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 RPS15AP5-201ENST00000436276 388 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 RN7SL807P-201ENST00000470923 297 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 RNU5F-8P-201ENST00000515941 111 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 RNU6-1012P-201ENST00000516606 109 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 SNORA40.15-201ENST00000516884 107 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.45□□□□□ -1.86
ERCC4Q92889 HSPE1P20-201ENST00000538133 289 ntBASIC3.45□□□□□ -1.86
ERCC4Q92889 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ERCC4Q92889 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.45□□□□□ -1.86
ERCC4Q92889 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ERCC4Q92889 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ERCC4Q92889 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ERCC4Q92889 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ERCC4Q92889 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ERCC4Q92889 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ERCC4Q92889 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.44□□□□□ -1.86
ERCC4Q92889 AC073325.2-201ENST00000339545 159 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 RNU6-222P-201ENST00000362438 107 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 RNU6-1301P-201ENST00000362724 104 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 Y_RNA.483-201ENST00000384380 101 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 MIR153-2-201ENST00000385225 87 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 USP9YP16-201ENST00000430287 407 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 USP9YP23-201ENST00000455085 407 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 SNORD127-201ENST00000458892 86 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 RNU7-87P-201ENST00000459343 62 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 AC016632.1-201ENST00000503994 196 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 RN7SKP43-201ENST00000516173 320 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 RNU5B-3P-201ENST00000516601 115 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 HSPE1P4-201ENST00000550617 308 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 AC027288.2-201ENST00000553028 243 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.44□□□□□ -1.86
ERCC4Q92889 MIR3668-201ENST00000582138 75 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 AC090425.1-201ENST00000610007 140 ntBASIC3.44□□□□□ -1.86
ERCC4Q92889 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.44□□□□□ -1.86
ERCC4Q92889 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.44□□□□□ -1.86
ERCC4Q92889 AC092268.1-201ENST00000342691 405 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 RNU6-799P-201ENST00000363567 107 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 RNU6-137P-201ENST00000363680 108 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 SNORD115-8-201ENST00000363856 82 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 SNORD115-38-201ENST00000365037 82 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 MIR32-201ENST00000384965 70 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 RNU6-847P-201ENST00000411115 108 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.43□□□□□ -1.86
ERCC4Q92889 AC139712.2-201ENST00000424302 339 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.43□□□□□ -1.86
ERCC4Q92889 RN7SL863P-201ENST00000462370 296 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 SNORA31.21-201ENST00000517180 77 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC4Q92889 AP003733.2-201ENST00000529409 171 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 MIR5195-201ENST00000583555 115 ntBASIC3.43□□□□□ -1.86
ERCC4Q92889 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC4Q92889 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.43□□□□□ -1.86
ERCC4Q92889 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC4Q92889 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC4Q92889 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ERCC4Q92889 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.43□□□□□ -1.86
ERCC4Q92889 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC4Q92889 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ERCC4Q92889 AC004944.1-201ENST00000517807 3059 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 Y_RNA.447-201ENST00000384184 113 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 RNU6-318P-201ENST00000384283 103 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 Y_RNA.504-201ENST00000384481 104 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 RNU6-748P-201ENST00000384648 107 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 Y_RNA.562-201ENST00000384695 113 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 MIR1302-6-201ENST00000408466 90 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC4Q92889 CYCSP48-201ENST00000417124 323 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 AL365496.1-201ENST00000426885 215 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC4Q92889 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC4Q92889 RNU6-1132P-201ENST00000459214 107 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 AP000870.1-201ENST00000472927 406 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 AP004217.1-201ENST00000480579 346 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 RNU6-1114P-201ENST00000516022 107 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms