Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 USP9YP12-201ENST00000450481 570 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 ZNF114P1-201ENST00000453500 292 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 TAF9P2-201ENST00000454958 515 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 snoU13.27-201ENST00000459278 104 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 MTCO2P6-201ENST00000463134 685 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 MTCO3P7-201ENST00000510008 774 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 RN7SKP88-201ENST00000516847 250 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 EIF4A1P12-201ENST00000551910 141 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AC103996.1-201ENST00000555468 102 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AC027807.1-201ENST00000559921 996 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AC090517.1-201ENST00000569307 266 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 MIR4742-201ENST00000581069 85 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AC025811.1-201ENST00000604312 472 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AP000240.1-201ENST00000609910 452 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 7SK.8-201ENST00000612110 250 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 7SK.11-201ENST00000615477 250 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 7SK.13-201ENST00000622040 250 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-552P-201ENST00000362869 119 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-1287P-201ENST00000362914 107 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-457P-201ENST00000363999 107 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNY1P12-201ENST00000364251 105 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 Y_RNA.367-201ENST00000365544 101 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-1060P-201ENST00000384664 107 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RPS29P13-201ENST00000402041 169 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-195P-201ENST00000411352 109 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RPL23AP95-201ENST00000426806 265 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AL133396.1-201ENST00000432048 687 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC007395.1-201ENST00000451333 677 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 C1DP4-201ENST00000455429 424 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AL163195.1-201ENST00000496941 348 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC034244.1-201ENST00000507687 207 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNA5SP481-201ENST00000516814 122 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-548P-201ENST00000517083 115 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 ELOCP32-201ENST00000548625 324 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 MIR3664-201ENST00000579074 99 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AP005136.1-201ENST00000579765 429 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 Z98751.3-201ENST00000604447 521 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC008945.2-201ENST00000606056 604 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 MIR6078-201ENST00000611069 100 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 AC068647.2-201ENST00000637380 353 ntBASIC0.62□□□□□ -2.31
MBD3L1Q8WWY6 RNU1-76P-201ENST00000362903 159 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-74P-201ENST00000384235 107 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 Y_RNA.504-201ENST00000384481 104 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 SNORA26.3-201ENST00000391119 136 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 RNU2-64P-201ENST00000411315 191 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MTCO1P21-201ENST00000416634 589 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AL117339.3-201ENST00000418733 162 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AL354692.1-201ENST00000423044 315 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 SNX2P2-201ENST00000424553 323 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 RPS23P5-201ENST00000495419 428 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC011406.1-201ENST00000512440 370 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 SNORD60.2-201ENST00000516883 86 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-165P-201ENST00000517170 99 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 DEFB131C-201ENST00000528817 165 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MTND1P8-201ENST00000571424 950 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MIR4775-201ENST00000581168 75 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MIR548AB-201ENST00000584917 84 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC009994.1-201ENST00000606889 253 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AL391834.2-201ENST00000609982 546 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 AC040896.1-201ENST00000613819 479 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 SNORA43.4-201ENST00000629559 138 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MIR338-201ENST00000636369 67 ntBASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.61□□□□□ -2.31
MBD3L1Q8WWY6 MTND5P17-201ENST00000418405 1603 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 AC106754.1-201ENST00000562632 1513 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 Y_RNA.132-201ENST00000363421 102 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 RNU5F-7P-201ENST00000363696 115 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 RNU4-56P-201ENST00000364700 142 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-827P-201ENST00000365553 106 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-1026P-201ENST00000384465 108 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 MIR1-2-201ENST00000384961 85 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 AC106883.1-201ENST00000418805 562 ntBASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.6□□□□□ -2.31
MBD3L1Q8WWY6 AC011233.1-201ENST00000422812 283 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms