Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL731563.1-201ENST00000442202 214 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-953P-201ENST00000459154 107 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.55□□□□□ -2
SNED1Q8TER0 AC022493.2-201ENST00000506122 481 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 AC096745.1-201ENST00000509945 370 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 SCARNA15.2-201ENST00000516409 127 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 SNORD116.3-201ENST00000517176 78 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.55□□□□□ -2
SNED1Q8TER0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.55□□□□□ -2
SNED1Q8TER0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.55□□□□□ -2
SNED1Q8TER0 AC025423.5-201ENST00000550230 219 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.55□□□□□ -2
SNED1Q8TER0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 AC007792.1-201ENST00000623023 402 ntBASIC2.55□□□□□ -2
SNED1Q8TER0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.55□□□□□ -2
SNED1Q8TER0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.55□□□□□ -2
SNED1Q8TER0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SNED1Q8TER0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNED1Q8TER0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SNED1Q8TER0 Y_RNA.188-201ENST00000363952 111 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 SNORD56.5-201ENST00000364281 72 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 Y_RNA.389-201ENST00000383924 113 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 Y_RNA.455-201ENST00000384230 98 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 Y_RNA.496-201ENST00000384444 101 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 RNU6-45P-201ENST00000384471 107 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 RNU6-306P-201ENST00000384617 107 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 FO393413.1-201ENST00000402892 195 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 PPP1R11P2-201ENST00000423543 382 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 USMG5P1-201ENST00000425964 177 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 AL365496.1-201ENST00000426885 215 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 USP9YP30-201ENST00000430729 455 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 AL359672.1-201ENST00000442302 409 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 SNORD5.1-201ENST00000458800 75 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 RNU7-23P-201ENST00000459465 62 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 AC092436.3-201ENST00000511788 257 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 RNU6-120P-201ENST00000516077 103 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 SCARNA16.2-201ENST00000516520 172 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 RNU6-635P-201ENST00000516651 102 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.54□□□□□ -2
SNED1Q8TER0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.54□□□□□ -2
SNED1Q8TER0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNED1Q8TER0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.54□□□□□ -2
SNED1Q8TER0 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 AL161423.1-201ENST00000613700 262 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 SDR42E1P2-201ENST00000614861 481 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.54□□□□□ -2
SNED1Q8TER0 AC073308.1-201ENST00000623696 305 ntBASIC2.54□□□□□ -2
SNED1Q8TER0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
SNED1Q8TER0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNED1Q8TER0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SNED1Q8TER0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNED1Q8TER0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SNED1Q8TER0 AC138393.1-203ENST00000327086 343 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNU6-371P-201ENST00000364283 108 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNU6-26P-201ENST00000383985 107 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 MT-TG-201ENST00000387429 68 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNU6-293P-201ENST00000411259 106 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RPL21P90-201ENST00000415692 466 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AL160275.3-201ENST00000423876 471 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.53□□□□□ -2
SNED1Q8TER0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.53□□□□□ -2
SNED1Q8TER0 AL512844.2-201ENST00000433990 593 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RPL37P6-201ENST00000460682 294 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AC008571.1-201ENST00000467232 300 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AC068781.1-201ENST00000488231 618 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 HMGB1P30-201ENST00000492455 606 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 MRPS35P2-201ENST00000508242 191 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNA5SP384-201ENST00000516615 116 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 SNORA31.22-201ENST00000517204 135 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 RNU6-840P-201ENST00000517275 65 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 MYL12BP1-201ENST00000569826 507 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 MIR5692A1-201ENST00000580523 69 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AC005899.2-201ENST00000584353 90 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AC092447.9-201ENST00000603395 144 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 AC104695.3-201ENST00000604052 296 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNED1Q8TER0 AC090132.2-201ENST00000615881 347 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNED1Q8TER0 AC005592.1-201ENST00000566527 1640 ntBASIC2.53□□□□□ -2
SNED1Q8TER0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2.01
SNED1Q8TER0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2.01
SNED1Q8TER0 Y_RNA.80-201ENST00000362996 102 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 U8.9-201ENST00000365667 134 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 Y_RNA.476-201ENST00000384347 108 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 Y_RNA.485-201ENST00000384395 102 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 RNU6-1222P-201ENST00000384615 107 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 MIR514A1-201ENST00000385133 98 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 Y_RNA.645-201ENST00000391229 102 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 RNU2-25P-201ENST00000411041 191 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 Z85995.1-201ENST00000415547 335 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNED1Q8TER0 HMGB1P27-201ENST00000431429 603 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms