Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC091951.3-201ENST00000504093 246 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 RNU6-377P-201ENST00000515965 102 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 RNU6-165P-201ENST00000517170 99 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC109479.2-201ENST00000517842 174 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC008015.1-201ENST00000555505 465 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 HMGN1P30-201ENST00000589286 268 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC073539.2-201ENST00000597113 165 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC105148.1-201ENST00000604961 409 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 U3.4-201ENST00000363352 213 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 RNU1-93P-201ENST00000364704 169 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 SNORA4.2-201ENST00000365313 147 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 RNU6-641P-201ENST00000384006 107 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 RNU6-533P-201ENST00000384144 107 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 MRPL42P2-201ENST00000403169 426 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC010975.2-201ENST00000427781 588 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC074344.1-201ENST00000512823 224 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 RNA5SP503-201ENST00000517047 117 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AL031775.1-201ENST00000607014 887 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 PCGEM1.1-201ENST00000613431 131 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AL031667.3-201ENST00000620124 655 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC068647.2-201ENST00000637380 353 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC006927.4-201ENST00000639187 543 ntBASIC0.62□□□□□ -2.31
ZNF439Q8NDP4 AC092268.1-201ENST00000342691 405 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 Y_RNA.4-201ENST00000362333 112 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 SNORA26.3-201ENST00000391119 136 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AL355143.1-201ENST00000407101 841 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 MIR1276-201ENST00000408707 83 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 Y_RNA.608-201ENST00000410647 95 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 RNU6-293P-201ENST00000411259 106 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 HIGD1AP15-201ENST00000416198 280 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 ELOCP4-201ENST00000420090 333 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC004941.2-201ENST00000427009 228 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 USP9YP14-201ENST00000430663 563 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 RNU7-14P-201ENST00000459331 62 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC007547.1-201ENST00000462177 490 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC104136.1-201ENST00000512969 394 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 RNU5F-4P-201ENST00000516581 114 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 RNU6-197P-201ENST00000516680 100 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC136628.3-201ENST00000521868 290 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 EIF4A1P12-201ENST00000551910 141 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AL442163.3-201ENST00000554110 156 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC091489.2-201ENST00000566263 604 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC109446.2-201ENST00000567872 497 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AL158050.2-201ENST00000605336 568 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 CTHRC1P1-201ENST00000605383 469 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC105129.3-201ENST00000605455 485 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AL049777.1-201ENST00000622740 518 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AL359740.1-201ENST00000624340 592 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 AC019226.2-201ENST00000625973 424 ntBASIC0.61□□□□□ -2.31
ZNF439Q8NDP4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 Y_RNA.22-201ENST00000362492 102 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 RNU1-76P-201ENST00000362903 159 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 RNU6-179P-201ENST00000363350 107 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 RNU6-1200P-201ENST00000384162 107 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 RNU6-45P-201ENST00000384471 107 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 COX6CP10-201ENST00000416832 224 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC010099.3-201ENST00000423896 409 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC112206.4-201ENST00000515142 405 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 RNU6-1098P-201ENST00000516772 96 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 RNU6-1220P-201ENST00000517126 108 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 ZNF321P-202ENST00000550843 495 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC021231.3-201ENST00000558497 370 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC090888.2-201ENST00000559765 1144 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 MIR4509-3-201ENST00000578671 94 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 MIR4509-2-201ENST00000583920 94 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC008945.2-201ENST00000606056 604 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AL353149.1-201ENST00000610667 244 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 MIR6504-201ENST00000613520 61 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC040896.1-201ENST00000613819 479 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 MIR4509-1-201ENST00000618224 94 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AC136475.10-201ENST00000620253 385 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
ZNF439Q8NDP4 AL391994.1-201ENST00000254724 282 ntBASIC0.59□□□□□ -2.31
ZNF439Q8NDP4 HSBP1P2-201ENST00000299671 229 ntBASIC0.59□□□□□ -2.31
ZNF439Q8NDP4 Y_RNA.324-201ENST00000365165 102 ntBASIC0.59□□□□□ -2.31
ZNF439Q8NDP4 RNU6-1026P-201ENST00000384465 108 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms