Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC107393.1-201ENST00000512403 346 ntBASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 SNORA25.14-201ENST00000516481 132 ntBASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 CBX3P4-201ENST00000538909 354 ntBASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 AC027288.2-201ENST00000553028 243 ntBASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 AC244205.2-202ENST00000635781 342 ntBASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.81□□□□□ -1.8
LINC00116Q8NCU8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 RNA5SP189-201ENST00000364920 115 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 RNU6-378P-201ENST00000384324 107 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 SNORA19-201ENST00000384737 128 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 Y_RNA.569-201ENST00000384749 103 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 MIR10B-201ENST00000385011 110 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 FTH1P15-201ENST00000406984 280 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 RPL23AP95-201ENST00000426806 265 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 AC007969.2-201ENST00000441891 191 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 RN7SKP49-201ENST00000516675 260 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 CR383656.8-201ENST00000549046 145 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 HSPE1P4-201ENST00000550617 308 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 UBL5P4-201ENST00000562584 236 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 AL356157.2-201ENST00000605122 111 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 AC007318.2-201ENST00000620999 243 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 SNORA43.4-201ENST00000629559 138 ntBASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LINC00116Q8NCU8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC022336.2-201ENST00000568966 2538 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 RNU6-626P-201ENST00000363354 107 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 RNU6-1280P-201ENST00000365211 107 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 Y_RNA.464-201ENST00000384282 110 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 MIR487A-201ENST00000385009 80 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 MIR888-201ENST00000401186 77 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC063976.3-201ENST00000426849 329 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 RNU7-120P-201ENST00000459334 63 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AP000873.1-201ENST00000463987 400 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 MRPL42P6-201ENST00000486397 371 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC087441.2-201ENST00000529141 262 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC016256.1-201ENST00000547971 354 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AL138963.2-201ENST00000605137 226 ntBASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00116Q8NCU8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 RNU6-740P-201ENST00000364734 105 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 RNA5SP167-201ENST00000365461 116 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 RNU6-281P-201ENST00000384212 103 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 RNU6-662P-201ENST00000384253 104 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 U8.10-201ENST00000384260 133 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 RNU6-1001P-201ENST00000411265 100 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 Y_RNA.626-201ENST00000411288 95 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 AC087499.2-201ENST00000432861 149 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 AC073901.1-201ENST00000462471 408 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 AC010620.2-201ENST00000600135 313 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 AL162424.1-201ENST00000602325 221 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00116Q8NCU8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AC096644.4-201ENST00000563417 2912 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 SNORA25.1-201ENST00000362326 128 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 RNU6-20P-201ENST00000384106 107 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 RNU6-159P-201ENST00000391080 106 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 COX6CP10-201ENST00000416832 224 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AC012308.1-201ENST00000451232 178 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 SNORD109B-201ENST00000458961 67 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 SNORD109A-201ENST00000459128 67 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 RPL26P26-201ENST00000480251 434 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 RN7SL20P-201ENST00000488827 297 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AC016632.1-201ENST00000503994 196 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.77□□□□□ -1.81
LINC00116Q8NCU8 RNU6-58P-201ENST00000517143 103 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms