Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MIR331-201ENST00000362302 94 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.105-201ENST00000363182 111 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RNU6-961P-201ENST00000363893 105 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.222-201ENST00000364264 102 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 SNORA51.4-201ENST00000364993 124 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 SNORA72.2-201ENST00000365028 127 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RNU6-20P-201ENST00000384106 107 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RNU6-937P-201ENST00000384325 106 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MIR192-201ENST00000384915 110 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MIR586-201ENST00000385035 97 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MIR561-201ENST00000385216 97 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 U3.39-201ENST00000408569 239 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RNU6-121P-201ENST00000410525 99 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.618-201ENST00000410949 107 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RAB28P5-201ENST00000427490 651 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RNU7-14P-201ENST00000459331 62 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RN7SKP92-201ENST00000517266 244 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AC007536.1-201ENST00000533382 349 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AC120057.2-201ENST00000571520 271 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 RN7SL703P-201ENST00000578485 302 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MIR4423-201ENST00000580922 80 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MIR5684-201ENST00000585074 65 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AC078899.3-201ENST00000599065 212 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AC011373.1-201ENST00000607270 237 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 uc_338.13-201ENST00000618243 179 ntBASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.97□□□□□ -1.93
CLRN3Q8NCR9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
CLRN3Q8NCR9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.96□□□□□ -1.93
CLRN3Q8NCR9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 Y_RNA.26-201ENST00000362539 101 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 U3.8-201ENST00000363675 217 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 Y_RNA.288-201ENST00000364854 92 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 ELOCP21-201ENST00000412558 336 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 RPL21P38-201ENST00000418090 167 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 AC114982.1-201ENST00000469402 321 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 AC021205.2-201ENST00000480069 347 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 AC109329.2-201ENST00000519658 482 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 SNORD113-5-201ENST00000607261 78 ntBASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLRN3Q8NCR9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 MIR410-201ENST00000362222 80 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RNU1-14P-201ENST00000362759 152 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 SNORD81.1-201ENST00000363064 77 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 Y_RNA.376-201ENST00000365638 108 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 U8.9-201ENST00000365667 134 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RNU6-21P-201ENST00000384710 107 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 Y_RNA.581-201ENST00000391017 97 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RPL21P3-201ENST00000395517 478 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AL357075.1-201ENST00000404107 726 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AL357139.1-201ENST00000407792 426 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 BMS1P22-201ENST00000414726 313 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RPEP3-201ENST00000425462 676 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 TOMM22P2-201ENST00000430735 237 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RPL12P20-201ENST00000475538 479 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 TRBVB-201ENST00000477100 408 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 SEPT14P8-201ENST00000508026 178 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 MIR449C-201ENST00000516047 92 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RNU6-107P-201ENST00000516643 102 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AP001781.1-201ENST00000530977 207 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AC090616.3-201ENST00000582184 217 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 MIR3138-201ENST00000585238 82 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 IPO5P1-202ENST00000600039 287 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 MIR3674-201ENST00000636576 68 ntBASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
CLRN3Q8NCR9 AL356274.2-201ENST00000624379 3752 ntBASIC2.94□□□□□ -1.94
CLRN3Q8NCR9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CLRN3Q8NCR9 RNU1-23P-201ENST00000363361 144 ntBASIC2.94□□□□□ -1.94
CLRN3Q8NCR9 SNORD113-8-201ENST00000363497 74 ntBASIC2.94□□□□□ -1.94
CLRN3Q8NCR9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms