Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.74□□□□□ -1.97
USP38Q8NB14 AC090096.1-201ENST00000489168 390 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC015911.1-201ENST00000495111 156 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.74□□□□□ -1.97
USP38Q8NB14 AC115990.1-201ENST00000526957 301 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.74□□□□□ -1.97
USP38Q8NB14 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.74□□□□□ -1.97
USP38Q8NB14 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.74□□□□□ -1.97
USP38Q8NB14 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC124303.1-201ENST00000605703 360 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AL133215.3-201ENST00000609801 448 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AL161423.1-201ENST00000613700 262 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 MIR5739-201ENST00000619803 80 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
USP38Q8NB14 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USP38Q8NB14 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP38Q8NB14 AL356292.1-201ENST00000283110 373 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP38Q8NB14 Y_RNA.88-201ENST00000363029 99 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 RNA5SP456-201ENST00000364002 114 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 SNORD32A-201ENST00000364805 84 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 RNY3P14-201ENST00000384309 102 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AC074085.1-201ENST00000413598 418 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 Z82209.1-201ENST00000422141 2135 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.73□□□□□ -1.97
USP38Q8NB14 RPS3AP52-201ENST00000435639 297 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AC080013.2-201ENST00000460866 323 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 RPL30P1-201ENST00000488676 339 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.73□□□□□ -1.97
USP38Q8NB14 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.73□□□□□ -1.97
USP38Q8NB14 MIR5571-201ENST00000577998 113 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.73□□□□□ -1.97
USP38Q8NB14 AC018889.1-201ENST00000605372 397 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AL355073.2-201ENST00000612106 557 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AL159153.1-201ENST00000619688 317 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 SNORD98-201ENST00000636377 67 ntBASIC2.73□□□□□ -1.97
USP38Q8NB14 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.73□□□□□ -1.97
USP38Q8NB14 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.73□□□□□ -1.97
USP38Q8NB14 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 RNA5SP181-201ENST00000410246 98 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.72□□□□□ -1.97
USP38Q8NB14 RPS12P2-201ENST00000439728 269 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 MTND4P18-201ENST00000447010 465 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 MTND1P17-201ENST00000448961 204 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 RNU7-26P-201ENST00000458980 63 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 RPS29P27-201ENST00000463711 170 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 AC104564.1-201ENST00000493028 407 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 MTND5P5-201ENST00000503764 376 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 AC016632.1-201ENST00000503994 196 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 PTP4A1P4-201ENST00000512479 322 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 ACA59.1-201ENST00000515966 143 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 RNU5F-2P-201ENST00000516066 82 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.72□□□□□ -1.97
USP38Q8NB14 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USP38Q8NB14 UBE2V2P2-201ENST00000587677 504 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 MIR8076-201ENST00000611401 83 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
USP38Q8NB14 TPTEP1-208ENST00000636884 213 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.72□□□□□ -1.97
USP38Q8NB14 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 MTND4P12-201ENST00000498999 1377 ntBASIC2.72□□□□□ -1.97
USP38Q8NB14 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
USP38Q8NB14 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USP38Q8NB14 RNU6-1285P-201ENST00000363480 105 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
USP38Q8NB14 RNU2-63P-201ENST00000410792 194 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.71□□□□□ -1.98
USP38Q8NB14 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.71□□□□□ -1.98
USP38Q8NB14 AIMP1P2-201ENST00000425294 312 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
USP38Q8NB14 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.71□□□□□ -1.98
USP38Q8NB14 snoU13.14-201ENST00000459372 104 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 MTND4P17-201ENST00000470444 350 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.71□□□□□ -1.98
USP38Q8NB14 SNORA31.16-201ENST00000516773 139 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 CPDP1-201ENST00000579660 283 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 AL138963.2-201ENST00000605137 226 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP38Q8NB14 AC016717.2-201ENST00000609089 5141 ntBASIC2.71□□□□□ -1.98
USP38Q8NB14 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.71□□□□□ -1.98
USP38Q8NB14 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
USP38Q8NB14 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.7□□□□□ -1.98
USP38Q8NB14 RNU1-72P-201ENST00000362976 153 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 Y_RNA.166-201ENST00000363730 102 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 Y_RNA.796-201ENST00000364268 102 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 RNU4-56P-201ENST00000364700 142 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 Y_RNA.799-201ENST00000364992 102 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 SNORA36A-201ENST00000384221 132 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 CBX3P9-201ENST00000402326 552 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL356432.1-201ENST00000405809 419 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 RPL37P10-201ENST00000412884 288 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 CYCSP48-201ENST00000417124 323 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL590556.1-201ENST00000423231 483 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.7□□□□□ -1.98
USP38Q8NB14 MTND5P20-201ENST00000448677 143 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL353752.1-201ENST00000454946 260 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.7□□□□□ -1.98
USP38Q8NB14 AC234781.5-201ENST00000508429 271 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms