Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 AC009310.1-201ENST00000414414 451 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 AL591806.2-201ENST00000433122 173 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.32□□□□□ -2.04
NME8Q8N427 AC087884.1-201ENST00000469738 328 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 AL163973.1-201ENST00000484753 577 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.32□□□□□ -2.04
NME8Q8N427 RNU6-835P-201ENST00000516974 104 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.32□□□□□ -2.04
NME8Q8N427 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 AL136221.1-201ENST00000621449 509 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 AC068137.3-201ENST00000639191 341 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 AC073869.6-201ENST00000640656 341 ntBASIC2.32□□□□□ -2.04
NME8Q8N427 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.32□□□□□ -2.04
NME8Q8N427 RNU4-15P-201ENST00000362613 141 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 U3.9-201ENST00000363823 204 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 RNU4-12P-201ENST00000365233 139 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 SNORA48.1-201ENST00000390879 135 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 MTCYBP2-201ENST00000407745 171 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 Y_RNA.599-201ENST00000410489 109 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 Y_RNA.619-201ENST00000410951 90 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NME8Q8N427 AL121601.2-201ENST00000438019 707 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 RNU7-167P-201ENST00000459160 62 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 RPL38P4-201ENST00000502376 214 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 AC008834.1-201ENST00000511612 175 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 SNORA40.12-201ENST00000516329 111 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 Y_RNA.693-201ENST00000516641 110 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.31□□□□□ -2.04
NME8Q8N427 AC002044.1-201ENST00000606707 158 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 AP001330.5-201ENST00000607176 411 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 AC098657.3-201ENST00000620434 263 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NME8Q8N427 MTND4P1-201ENST00000457501 1466 ntBASIC2.31□□□□□ -2.04
NME8Q8N427 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NME8Q8N427 RNU6-266P-201ENST00000364225 107 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 Y_RNA.255-201ENST00000364581 97 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 SNORD37.1-201ENST00000390968 65 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.3□□□□□ -2.04
NME8Q8N427 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.3□□□□□ -2.04
NME8Q8N427 MTND1P4-201ENST00000435196 415 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.3□□□□□ -2.04
NME8Q8N427 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.3□□□□□ -2.04
NME8Q8N427 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.3□□□□□ -2.04
NME8Q8N427 RNU1-131P-201ENST00000458943 161 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 RNU7-180P-201ENST00000459240 63 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 AC021231.3-201ENST00000558497 370 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.3□□□□□ -2.04
NME8Q8N427 AC022254.1-201ENST00000567857 235 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.3□□□□□ -2.04
NME8Q8N427 AC009314.1-201ENST00000603871 304 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 AC025754.2-201ENST00000606491 432 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 AC009318.2-201ENST00000610917 651 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.3□□□□□ -2.04
NME8Q8N427 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.3□□□□□ -2.04
NME8Q8N427 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.3□□□□□ -2.04
NME8Q8N427 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NME8Q8N427 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NME8Q8N427 Y_RNA.378-201ENST00000365652 113 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 AL117339.3-201ENST00000418733 162 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 AL133396.1-201ENST00000432048 687 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.29□□□□□ -2.04
NME8Q8N427 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.29□□□□□ -2.04
NME8Q8N427 RNU6-1281P-201ENST00000516223 105 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 SNORA25.17-201ENST00000517184 124 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.29□□□□□ -2.04
NME8Q8N427 MTND1P35-201ENST00000526739 508 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.29□□□□□ -2.04
NME8Q8N427 MIR4769-201ENST00000584126 77 ntBASIC2.29□□□□□ -2.04
NME8Q8N427 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.29□□□□□ -2.04
NME8Q8N427 RNU6-428P-201ENST00000362942 107 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 RNU4-66P-201ENST00000365199 138 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 RNU6-692P-201ENST00000384496 107 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 RNU6-192P-201ENST00000391253 100 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 MIR934-201ENST00000401241 83 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 AL606923.1-201ENST00000406616 190 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 RNU2-2P-201ENST00000410396 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 MTCO1P20-201ENST00000425366 358 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.28□□□□□ -2.04
NME8Q8N427 HMGN2P18-201ENST00000450680 270 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 MTND3P16-201ENST00000452205 344 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 AC083798.1-201ENST00000472671 131 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.28□□□□□ -2.04
NME8Q8N427 HMGB1P33-201ENST00000563485 527 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 AC109446.1-201ENST00000566172 220 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.28□□□□□ -2.04
NME8Q8N427 U2.15-201ENST00000611544 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.16-201ENST00000613119 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.12-201ENST00000613778 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.20-201ENST00000613956 192 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NME8Q8N427 U2.9-201ENST00000615427 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.11-201ENST00000616345 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.2-201ENST00000616535 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 uc_338.34-201ENST00000617467 174 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.3-201ENST00000617785 191 ntBASIC2.28□□□□□ -2.04
NME8Q8N427 U2.19-201ENST00000618602 191 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms