Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SNORD6-201ENST00000365444 73 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 MIR141-201ENST00000384975 95 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AC023141.4-201ENST00000412031 328 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AC073264.2-201ENST00000448886 166 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AL162591.2-201ENST00000449634 317 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 HMGN2P7-201ENST00000456186 273 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 RPL36AP21-201ENST00000490372 323 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AC006445.2-201ENST00000510061 472 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AP006289.1-201ENST00000538089 277 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 FAM27D1-201ENST00000612308 341 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 MIR6780A-201ENST00000615089 68 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AC069528.2-201ENST00000624849 1991 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 RNU6-106P-201ENST00000384405 107 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 SNORA12-201ENST00000391162 147 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AC126124.2-201ENST00000413542 321 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AL135786.1-201ENST00000415892 214 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AC009220.1-201ENST00000451614 275 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AL441985.1-201ENST00000457727 251 ntBASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC116Q8IYX3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 RNU6-1210P-201ENST00000363775 107 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 DYNLT3P1-201ENST00000378574 347 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 RPS16P5-201ENST00000406501 404 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 RPS26P55-201ENST00000471178 356 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 RN7SL817P-201ENST00000480777 288 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 RN7SKP289-201ENST00000517244 295 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 AC012493.2-201ENST00000595083 291 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 RMST_8.1-201ENST00000610287 165 ntBASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC116Q8IYX3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 AC026241.1-201ENST00000517873 2142 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 MTND5P18-201ENST00000445624 1801 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 MIR448-201ENST00000362131 111 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 SNORA27.1-201ENST00000362604 124 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 RNU6-655P-201ENST00000362858 107 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 RNA5SP189-201ENST00000364920 115 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 RNU1-44P-201ENST00000384453 163 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 RPL21P10-201ENST00000463521 490 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 RN7SL41P-201ENST00000476144 297 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 HMGN2P9-201ENST00000476875 229 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 AC005921.1-201ENST00000510589 286 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 AL160290.3-201ENST00000604869 165 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 AC093732.2-201ENST00000607950 274 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 uc_338.18-201ENST00000615451 175 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 AC125257.1-201ENST00000560400 2930 ntBASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC116Q8IYX3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC116Q8IYX3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC116Q8IYX3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC116Q8IYX3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC116Q8IYX3 AL356292.1-201ENST00000283110 373 ntBASIC4.18□□□□□ -1.74
CCDC116Q8IYX3 snoU2_19.1-201ENST00000362361 80 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms