Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MTND3P5-201ENST00000512798 333 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AC026407.1-201ENST00000518369 204 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 MTCO3P23-201ENST00000561363 289 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 MIR5583-1-201ENST00000580941 59 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 BNIP3P16-201ENST00000589779 534 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AL034555.1-201ENST00000604816 211 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AC018889.1-201ENST00000605372 397 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 RNU4-15P-201ENST00000362613 141 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 RNU6-43P-201ENST00000384302 107 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AF228730.1-201ENST00000397972 663 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 RNA5SP247-201ENST00000411181 105 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC090960.1-201ENST00000421072 306 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 Z82205.1-201ENST00000428456 297 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC079140.5-201ENST00000507882 310 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC093259.1-201ENST00000509755 300 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC010493.1-201ENST00000513479 292 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AL137161.1-201ENST00000532231 390 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC119751.7-201ENST00000600494 245 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AP001596.2-201ENST00000608410 312 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 SNORD98-201ENST00000636377 67 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 MIR3974-201ENST00000637126 96 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 ELL2P3-201ENST00000457883 1602 ntBASIC1.39□□□□□ -2.19
CDKL3Q8IVW4 AC233981.2-201ENST00000611524 1614 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 RNU6-827P-201ENST00000365553 106 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 Y_RNA.399-201ENST00000383955 105 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 RNU6-517P-201ENST00000384362 110 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 RPS29P13-201ENST00000402041 169 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AL117339.3-201ENST00000418733 162 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 MTCYBP8-201ENST00000422855 651 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 MTCO3P46-201ENST00000425787 232 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC010975.2-201ENST00000427781 588 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 RNU7-63P-201ENST00000459054 62 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC145146.1-201ENST00000496370 254 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC022447.4-201ENST00000504053 364 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 COPS8P3-201ENST00000526024 482 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 HIF1AP1-201ENST00000553642 175 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 TRAV32-201ENST00000553993 340 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 SUB1P3-201ENST00000564581 315 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AC073648.5-201ENST00000603502 305 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 AP001485.1-201ENST00000604799 199 ntBASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CDKL3Q8IVW4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 RNU5A-6P-201ENST00000384136 116 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 RNU6-160P-201ENST00000384591 107 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 Y_RNA.553-201ENST00000384670 102 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 SNORA12-201ENST00000391162 147 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 RNU6-321P-201ENST00000410912 106 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AL590135.1-201ENST00000422215 156 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC019205.3-201ENST00000424573 156 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC073464.1-201ENST00000429823 534 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC016700.2-201ENST00000446011 156 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 RNU7-167P-201ENST00000459160 62 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC015911.1-201ENST00000495111 156 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AK3P2-201ENST00000507976 429 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC010486.3-201ENST00000511602 785 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 MIR449C-201ENST00000516047 92 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AL161670.1-201ENST00000554348 137 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC103996.1-201ENST00000555468 102 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 MIR4422-201ENST00000581938 83 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 MIR4781-201ENST00000585250 76 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AL391646.1-201ENST00000603860 190 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 AC005609.4-201ENST00000625071 447 ntBASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.37□□□□□ -2.19
CDKL3Q8IVW4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDKL3Q8IVW4 RNU6-23P-201ENST00000363283 107 ntBASIC1.36□□□□□ -2.19
CDKL3Q8IVW4 SNORD32B-201ENST00000364460 84 ntBASIC1.36□□□□□ -2.19
CDKL3Q8IVW4 SNORD32A-201ENST00000364805 84 ntBASIC1.36□□□□□ -2.19
CDKL3Q8IVW4 RNU6-996P-201ENST00000365438 107 ntBASIC1.36□□□□□ -2.19
CDKL3Q8IVW4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDKL3Q8IVW4 RNU6-142P-201ENST00000384019 107 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms