Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HULC.1-201ENST00000612720 240 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 PCGEM1.1-201ENST00000613431 131 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC022513.1-201ENST00000624512 117 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 U3.9-201ENST00000363823 204 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 SNORD73A-201ENST00000386062 65 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 RNA5SP219-201ENST00000390940 113 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 MIR1289-2-201ENST00000408360 111 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 RNU2-41P-201ENST00000410991 178 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AC123900.1-201ENST00000420390 96 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AL358453.1-201ENST00000422522 250 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AC002486.1-201ENST00000435098 391 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 SNRPEP8-201ENST00000442866 260 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AC010095.1-201ENST00000443543 144 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AMD1P1-201ENST00000457220 922 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 RPS3AP17-201ENST00000472594 777 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 YWHAEP4-201ENST00000505390 198 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 FAM206BP-201ENST00000510179 541 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 MTND4P7-201ENST00000523876 130 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AC010900.2-201ENST00000604508 210 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AC007684.1-201ENST00000609671 477 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 SNORA43.4-201ENST00000629559 138 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 ELL2P3-201ENST00000457883 1602 ntBASIC1.48□□□□□ -2.17
NUDCD3Q8IVD9 Y_RNA.553-201ENST00000384670 102 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 SNORA12.2-201ENST00000391040 156 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AL606923.1-201ENST00000406616 190 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC090960.1-201ENST00000421072 306 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AL121601.2-201ENST00000438019 707 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 RNU1-131P-201ENST00000458943 161 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC008628.2-201ENST00000502605 298 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC114801.2-201ENST00000503825 781 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 RPL39P5-202ENST00000512505 151 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 RN7SKP298-201ENST00000515950 94 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 RNU6-1098P-201ENST00000516772 96 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 SNORA44.1-201ENST00000517031 108 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AL158211.1-201ENST00000566763 763 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 CYP4A27P-201ENST00000567218 190 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 MIR4424-201ENST00000585257 86 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AL158827.2-201ENST00000602494 330 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 RMST_6.1-201ENST00000611980 203 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 AL691447.3-201ENST00000635020 330 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 MIR3974-201ENST00000637126 96 ntBASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NUDCD3Q8IVD9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 Y_RNA.1-201ENST00000352915 104 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 Y_RNA.296-201ENST00000364930 108 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 MIR504-201ENST00000385065 83 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AP000275.1-201ENST00000411943 390 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC139712.2-201ENST00000424302 339 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 MTCO2P18-201ENST00000457151 658 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 RNU7-138P-201ENST00000459479 64 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 TOMM22P6-201ENST00000465035 409 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC010409.1-201ENST00000487382 476 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 HMGB1P29-201ENST00000505659 499 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC010424.1-201ENST00000506336 297 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 EIF4A1P12-201ENST00000551910 141 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC021231.3-201ENST00000558497 370 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AC005786.1-201ENST00000588553 154 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 VN1R80P-201ENST00000597126 338 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.46□□□□□ -2.18
NUDCD3Q8IVD9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 AC245060.5-201ENST00000610778 3293 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 RNU1-62P-201ENST00000362599 164 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 Y_RNA.255-201ENST00000364581 97 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 Y_RNA.359-201ENST00000365498 102 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-438P-201ENST00000365561 103 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 SNORA32.2-201ENST00000384049 122 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 SNORA11.2-201ENST00000408318 127 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 NCOR1P3-201ENST00000420479 303 ntBASIC1.45□□□□□ -2.18
NUDCD3Q8IVD9 AL606489.2-201ENST00000433886 234 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms