Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC074117.2-201ENST00000417130 397 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AP001025.1-201ENST00000486139 332 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AC096772.1-201ENST00000609146 564 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 U4.7-201ENST00000638126 106 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
NPHP3Q7Z494 AC233981.2-201ENST00000611524 1614 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 RNU6-877P-201ENST00000383868 107 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.540-201ENST00000384638 111 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 HMGN2P38-201ENST00000423806 265 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 MRPS10P2-201ENST00000431226 381 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 AL031274.1-201ENST00000450334 232 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.3□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.665-201ENST00000516177 98 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 MTND1P5-201ENST00000517906 940 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 AC009127.3-201ENST00000570531 403 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 SNORD53B-201ENST00000577887 78 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 BNIP3P25-201ENST00000596023 559 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 CTHRC1P1-201ENST00000605383 469 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 AC021646.1-201ENST00000605469 484 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 AC092794.1-201ENST00000612734 582 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 U4atac.1-201ENST00000618345 95 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 MIR3662-201ENST00000637030 95 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 MIR3529-201ENST00000637713 78 ntBASIC2.3□□□□□ -2.04
NPHP3Q7Z494 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPHP3Q7Z494 MTND4P23-201ENST00000447723 1363 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 SNORD114-19-201ENST00000363072 75 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNU6-527P-201ENST00000363425 104 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNA5SP240-201ENST00000365355 128 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNU1-148P-201ENST00000384472 162 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.29□□□□□ -2.04
NPHP3Q7Z494 ZNF885P-201ENST00000420174 1098 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AL365400.1-201ENST00000431854 640 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 CYP2C59P-201ENST00000457790 269 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 HMGN2P26-201ENST00000463169 339 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RPS29P25-201ENST00000481709 171 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AC069439.1-201ENST00000494739 167 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 MTCYBP18-201ENST00000501056 747 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNU6-377P-201ENST00000515965 102 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNU6-1069P-201ENST00000516612 133 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNU6-323P-201ENST00000521915 107 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 CYCSP27-201ENST00000527643 293 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AC103996.1-201ENST00000555468 102 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 PSMA3P-201ENST00000555485 635 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 MIR5692C1-201ENST00000585309 91 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AP003465.2-201ENST00000602571 373 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AL357078.3-201ENST00000607528 618 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AC104458.1-201ENST00000608243 463 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
NPHP3Q7Z494 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
NPHP3Q7Z494 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NPHP3Q7Z494 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NPHP3Q7Z494 RNU6-827P-201ENST00000365553 106 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 RNU6-622P-201ENST00000384272 103 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.573-201ENST00000384763 105 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 SUMO2P12-201ENST00000405924 140 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 MIR1277-201ENST00000408536 78 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 SNORA19.2-201ENST00000516013 114 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AC069113.1-201ENST00000517763 267 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AC025423.5-201ENST00000550230 219 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 MIR3941-201ENST00000582572 103 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AC107304.1-201ENST00000604229 296 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
NPHP3Q7Z494 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPHP3Q7Z494 RNU6-1252P-201ENST00000363054 104 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RNU6-105P-201ENST00000363909 104 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RNU6-60P-201ENST00000364792 103 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 ARL5AP1-201ENST00000418991 388 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 SNRPEP10-201ENST00000420249 274 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 NFU1P2-201ENST00000448700 469 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AC006026.2-201ENST00000457376 180 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RNU7-138P-201ENST00000459479 64 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RPL30P12-201ENST00000474666 353 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RNU7-193P-201ENST00000516723 65 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RNA5SP364-201ENST00000516938 78 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AP005597.4-201ENST00000526762 229 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AC073410.2-201ENST00000603240 332 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AL713866.2-201ENST00000603579 219 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AC090617.10-201ENST00000624308 134 ntBASIC2.27□□□□□ -2.05
NPHP3Q7Z494 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.27□□□□□ -2.05
NPHP3Q7Z494 RNU6-529P-201ENST00000363383 104 ntBASIC2.26□□□□□ -2.05
NPHP3Q7Z494 RNU1-42P-201ENST00000364033 160 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms