Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MTND2P8-201ENST00000450555 1025 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC104164.3-201ENST00000467363 1258 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC022868.1-201ENST00000517767 391 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS13CQ709C8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC122134.1-202ENST00000569111 1201 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC242628.1-201ENST00000606810 391 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 MIR7844-201ENST00000616161 122 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RBBP4P6-201ENST00000508098 202 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS13CQ709C8 MIR3921-201ENST00000577308 85 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 MTND1P15-201ENST00000579262 949 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC006504.8-201ENST00000621046 635 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 SNORD3E-202ENST00000627253 216 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 MIR1262-201ENST00000408276 93 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 MTND1P14-201ENST00000427400 950 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 FABP5P14-201ENST00000437273 393 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RNU1-117P-201ENST00000517041 158 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RNU2-60P-201ENST00000517290 128 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 RNU6-127P-201ENST00000390897 107 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 RNA5SP163-201ENST00000410304 99 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 AC022364.2-201ENST00000457963 554 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 SNORA3B-201ENST00000391305 131 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 AC012308.1-201ENST00000451232 178 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 AC010424.1-201ENST00000506336 297 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 RNA5SP481-201ENST00000516814 122 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 AC008993.2-201ENST00000631744 806 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 RNA5SP258-201ENST00000362750 119 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 RNU6-486P-201ENST00000363116 107 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.82□□□□□ -2.54
VPS13CQ709C8 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 TRAV32-201ENST00000553993 340 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 TMF1P1-201ENST00000576058 373 ntBASIC-0.82□□□□□ -2.54
VPS13CQ709C8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.82□□□□□ -2.54
VPS13CQ709C8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.83□□□□□ -2.54
VPS13CQ709C8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC107027.2-201ENST00000512197 115 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC024581.2-201ENST00000619986 252 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 SCARNA4-202ENST00000625402 129 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 RNA5SP517-201ENST00000364724 117 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 RNU6-821P-201ENST00000390995 107 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC007215.1-201ENST00000464893 276 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC022616.2-201ENST00000523185 300 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AL391813.1-201ENST00000603098 260 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC098483.2-201ENST00000603158 454 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 MTND4P5-201ENST00000435821 1374 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 RNU1-76P-201ENST00000362903 159 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 ARL5AP1-201ENST00000418991 388 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC087499.4-201ENST00000448505 178 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 RNA5SP291-201ENST00000517222 105 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC011195.1-201ENST00000578177 177 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 AC006441.5-201ENST00000612680 209 ntBASIC-0.83□□□□□ -2.54
VPS13CQ709C8 RNU4-36P-201ENST00000364294 144 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 MIR204-201ENST00000385200 110 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 MIR454-201ENST00000390180 115 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 MTND2P5-201ENST00000432656 1006 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 SNORA25.18-201ENST00000607153 114 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AL163051.2-201ENST00000618976 735 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AP000676.3-201ENST00000623299 569 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC017037.3-201ENST00000625016 472 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 HLA-S-202ENST00000425174 53 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AL008629.1-201ENST00000438615 184 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC005042.3-201ENST00000453230 174 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 BNIP3P23-201ENST00000599655 511 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 RMST_4.1-201ENST00000616886 107 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC103705.1-201ENST00000619013 241 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC091912.2-201ENST00000624798 167 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AL034345.1-201ENST00000407768 123 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 MLLT10P1-201ENST00000418346 262 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 USP9YP25-201ENST00000457708 443 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 RN7SKP164-201ENST00000516138 266 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 RNU6-706P-201ENST00000517229 104 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13CQ709C8 AC019131.2-201ENST00000609071 870 ntBASIC-0.84□□□□□ -2.54
VPS13CQ709C8 SNORA8.2-201ENST00000384372 139 ntBASIC-0.85□□□□□ -2.55
VPS13CQ709C8 RNU6-180P-201ENST00000516697 61 ntBASIC-0.85□□□□□ -2.55
VPS13CQ709C8 MIR4306-201ENST00000583390 91 ntBASIC-0.85□□□□□ -2.55
VPS13CQ709C8 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.85□□□□□ -2.55
VPS13CQ709C8 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.85□□□□□ -2.55
VPS13CQ709C8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms