Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AL031659.1-201ENST00000447075 539 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 RPL30P14-201ENST00000482744 348 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AC140059.1-201ENST00000489238 361 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 RPL23AP49-201ENST00000492925 468 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
CNKSR3Q6P9H4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 SNORD116-18-201ENST00000383961 92 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 MIR487A-201ENST00000385009 80 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 MIR10B-201ENST00000385011 110 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 MIR153-2-201ENST00000385225 87 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-1154P-201ENST00000391001 104 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 RNU7-170P-201ENST00000459303 61 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC117440.1-201ENST00000474107 571 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC026333.2-201ENST00000542164 106 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 AC005828.6-201ENST00000606610 232 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 MAPK10-253ENST00000641010 4072 ntBASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CNKSR3Q6P9H4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.217-201ENST00000364214 105 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.272-201ENST00000364696 102 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-281P-201ENST00000384212 103 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNA5SP31-201ENST00000411144 127 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC092047.1-201ENST00000424997 240 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC098614.2-201ENST00000426040 255 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 WARS2P1-201ENST00000429678 537 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC007395.1-201ENST00000451333 677 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.641-201ENST00000459414 105 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC006445.2-201ENST00000510061 472 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-313P-201ENST00000516317 112 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-62P-201ENST00000516526 102 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 UBL5P4-201ENST00000562584 236 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC005296.1-201ENST00000616145 209 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 AC006111.3-201ENST00000622137 383 ntBASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
CNKSR3Q6P9H4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AC022336.2-201ENST00000568966 2538 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 RNU1-18P-201ENST00000363062 164 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 SNORA29-201ENST00000384183 140 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 U8.10-201ENST00000384260 133 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-140P-201ENST00000384566 108 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.568-201ENST00000384742 113 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 MIR329-1-201ENST00000385028 80 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 RNU6-1168P-201ENST00000390831 104 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AC243964.1-201ENST00000441814 261 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 SNORA43.2-201ENST00000516652 128 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AL391261.3-201ENST00000557194 520 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 MIR5695-201ENST00000579717 85 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 MIR3609-201ENST00000582661 80 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AC020914.4-201ENST00000597690 277 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AC093732.2-201ENST00000607950 274 ntBASIC3.61□□□□□ -1.83
CNKSR3Q6P9H4 AL365222.1-201ENST00000614661 98 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms