Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 VN1R108P-201ENST00000431580 830 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 AC112492.4-201ENST00000456549 352 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 RNU6-405P-201ENST00000516637 110 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 GNAI2P1-201ENST00000541815 315 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 AC103987.3-201ENST00000582071 292 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 PIGPP4-201ENST00000584447 307 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 U2.17-201ENST00000611454 95 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 uc_338.34-201ENST00000617467 174 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 AC068792.1-201ENST00000621354 417 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ATL3Q6DD88 MTND5P26-201ENST00000426018 1752 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 ZNF72P-201ENST00000425869 1908 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 U8.1-201ENST00000362843 134 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 SNORD115-3-201ENST00000363100 82 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 RNU6-38P-201ENST00000384085 107 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 MTCYBP2-201ENST00000407745 171 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 RNU4-55P-201ENST00000410731 137 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC244670.1-201ENST00000436879 112 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 RNU6-333P-201ENST00000459117 107 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 RNU6-261P-201ENST00000459506 102 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 MTCO3P38-201ENST00000468910 766 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC132942.1-201ENST00000486753 483 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 SNORA14.1-201ENST00000516113 141 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 SNORA31.16-201ENST00000516773 139 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC069113.1-201ENST00000517763 267 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AP005597.4-201ENST00000526762 229 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.68□□□□□ -2.14
ATL3Q6DD88 MIR3136-201ENST00000583498 78 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 MIR3611-201ENST00000584484 83 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AC004223.2-201ENST00000590309 544 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AL034555.1-201ENST00000604816 211 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 RNU6-85P-201ENST00000605989 107 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 AL353997.5-201ENST00000618886 171 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 SNORD98-201ENST00000636377 67 ntBASIC1.68□□□□□ -2.14
ATL3Q6DD88 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ATL3Q6DD88 RNU6-82P-201ENST00000363970 107 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 RNU6-259P-201ENST00000383999 107 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 SNORD116-2-201ENST00000384274 95 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 SNORD116-6-201ENST00000384711 96 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 BTF3L4P2-201ENST00000392798 346 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 RNA5SP201-201ENST00000410316 124 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL663109.1-201ENST00000411498 844 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 MTCO2P3-201ENST00000442543 421 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC083798.1-201ENST00000472671 131 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC093259.1-201ENST00000509755 300 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC087441.2-201ENST00000529141 262 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 TRAV32-201ENST00000553993 340 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AL118558.2-201ENST00000556294 238 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC107304.1-201ENST00000604229 296 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AP001836.1-201ENST00000604675 523 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC103705.1-201ENST00000619013 241 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC139792.3-201ENST00000623525 224 ntBASIC1.67□□□□□ -2.14
ATL3Q6DD88 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
ATL3Q6DD88 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ATL3Q6DD88 CBX3P1-201ENST00000325243 554 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 Y_RNA.167-201ENST00000363735 109 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 Y_RNA.409-201ENST00000383990 98 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 SNORA12-201ENST00000391162 147 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AL031274.1-201ENST00000450334 232 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC145146.1-201ENST00000496370 254 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 AK3P2-201ENST00000507976 429 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC091874.1-201ENST00000511402 339 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 RNU6-1069P-201ENST00000516612 133 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms