Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
USPL1Q5W0Q7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.21□□□□□ -1.73
USPL1Q5W0Q7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.21□□□□□ -1.73
USPL1Q5W0Q7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 RNU6-20P-201ENST00000384106 107 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 RNU6-662P-201ENST00000384253 104 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 MIR3074-201ENST00000384885 81 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 SNORA46.1-201ENST00000391069 153 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 RPL23AP36-201ENST00000413895 458 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 CYCSP48-201ENST00000417124 323 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 RPL23AP82-202ENST00000427528 469 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AC112220.1-201ENST00000434628 355 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AC109925.1-201ENST00000478069 331 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 RPS29P20-201ENST00000489592 171 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 SNORA40.9-201ENST00000515895 93 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 MIR3136-201ENST00000583498 78 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AC004944.1-201ENST00000517807 3059 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 AL079305.1-201ENST00000623159 3008 ntBASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USPL1Q5W0Q7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AL109809.4-201ENST00000603520 2185 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 UBE2WP1-201ENST00000362030 340 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.136-201ENST00000363444 102 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.286-201ENST00000364813 102 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 RNU6-245P-201ENST00000384020 107 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 RNU6-746P-201ENST00000384112 109 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 RNU4-30P-201ENST00000410245 143 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AC007215.1-201ENST00000464893 276 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AC074133.1-201ENST00000515696 183 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AP002392.1-201ENST00000537692 208 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AC233702.2-202ENST00000562547 291 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 RNU6-91P-201ENST00000607774 107 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 AC010999.1-201ENST00000611856 324 ntBASIC4.2□□□□□ -1.74
USPL1Q5W0Q7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 RBBP8P1-201ENST00000449447 1844 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 MIR410-201ENST00000362222 80 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.76-201ENST00000362931 109 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.275-201ENST00000364726 110 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 RNY4P28-201ENST00000365281 93 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 AL031121.1-201ENST00000406553 254 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 RPS4XP2-201ENST00000458402 793 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 RN7SL863P-201ENST00000462370 296 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 RNU6-1212P-201ENST00000517023 104 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 AC005176.2-201ENST00000596933 147 ntBASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
USPL1Q5W0Q7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 RNU6-545P-201ENST00000362681 104 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.82-201ENST00000363000 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.92-201ENST00000363043 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.235-201ENST00000364412 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 RNU4-56P-201ENST00000364700 142 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.306-201ENST00000365015 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.312-201ENST00000365089 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.322-201ENST00000365151 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 RNU6-1175P-201ENST00000365200 107 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 SNORA36A-201ENST00000384221 132 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 PCNPP3-201ENST00000393579 471 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.626-201ENST00000411288 95 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 RHEBP3-201ENST00000411920 351 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 AC245291.1-201ENST00000419501 328 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 AL161651.1-201ENST00000440882 223 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.650-201ENST00000459002 102 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.683-201ENST00000516508 93 ntBASIC4.18□□□□□ -1.74
USPL1Q5W0Q7 Y_RNA.777-201ENST00000516982 102 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms