Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 AC011471.1-201ENST00000585766 187 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 MIR3199-2-201ENST00000636243 86 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RNU1-18P-201ENST00000363062 164 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 SNORD87-201ENST00000364849 89 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RNU6-215P-201ENST00000365169 102 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RNU6-487P-201ENST00000365430 104 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RNU6-1264P-201ENST00000383891 107 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 Y_RNA.572-201ENST00000384757 98 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RPL21P17-201ENST00000397467 475 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 MIR513C-201ENST00000401352 84 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RPL30P13-201ENST00000418873 348 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RNU6-1211P-201ENST00000459179 105 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 RPL31P41-201ENST00000477967 372 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 AC136628.3-201ENST00000521868 290 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 MIR3923-201ENST00000579521 83 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 AC013791.1-201ENST00000616619 62 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 ZYXP1-201ENST00000617638 118 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 U7.8-201ENST00000619968 63 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 AC002543.1-201ENST00000299783 1954 ntBASIC4.54□□□□□ -1.68
RNF20Q5VTR2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF20Q5VTR2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 AC010329.5-201ENST00000623497 2174 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 Y_RNA.71-201ENST00000362892 104 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 U1.1-201ENST00000384101 164 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 SNORA3.3-201ENST00000408712 125 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RNU6-628P-201ENST00000410675 107 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 AL591419.1-201ENST00000427423 339 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 AC146507.2-201ENST00000460608 476 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RAC1P2-201ENST00000511164 579 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 AC107027.2-201ENST00000512197 115 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RNU2-58P-201ENST00000516403 183 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RNU6-1234P-201ENST00000516877 103 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 CYCSP30-201ENST00000546447 172 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 MIR3136-201ENST00000583498 78 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 HMGN2P15-201ENST00000585707 270 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 MIR6810-201ENST00000622701 70 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 AC073308.1-201ENST00000623696 305 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 AC018692.3-201ENST00000623929 123 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RNA5SP196-201ENST00000625967 102 ntBASIC4.53□□□□□ -1.68
RNF20Q5VTR2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF20Q5VTR2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.127-201ENST00000363386 109 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 RNA5SP283-201ENST00000365604 119 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 SNORA71B-202ENST00000439232 272 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AL161651.1-201ENST00000440882 223 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 RPS4XP13-201ENST00000483219 789 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC022695.1-201ENST00000522089 237 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC011602.1-201ENST00000546484 331 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC007224.1-201ENST00000564410 144 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC105137.2-201ENST00000569073 466 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 MIR4286-201ENST00000580651 93 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AC005520.5-201ENST00000613926 164 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 AL078604.3-201ENST00000615580 211 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.52□□□□□ -1.69
RNF20Q5VTR2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF20Q5VTR2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.24-201ENST00000362508 103 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 RNU6-103P-201ENST00000363686 107 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.273-201ENST00000364703 102 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.287-201ENST00000364853 94 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 PTMAP5-201ENST00000393073 333 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 AL031003.1-201ENST00000404229 172 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 AL035461.1-201ENST00000421490 332 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 RNA5SP208-201ENST00000516156 78 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms