Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC027338.1-201ENST00000514840 825 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 RNU1-86P-201ENST00000516108 154 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 RNU1-107P-201ENST00000516617 154 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 MRPS36P5-201ENST00000551909 298 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 RNU6-374P-201ENST00000364146 108 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 RNU6-898P-201ENST00000365627 104 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 MIR1185-1-201ENST00000408598 86 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 SEPT14P17-201ENST00000617978 177 ntBASIC-0.41□□□□□ -2.48
VPS13DQ5THJ4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MTND4P5-201ENST00000435821 1374 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 SNORA8.2-201ENST00000384372 139 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 RNA5SP323-201ENST00000391094 133 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 SNORA75.2-201ENST00000391138 150 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MTND5P2-201ENST00000442927 1142 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 RPL39P38-201ENST00000467018 153 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC097473.1-201ENST00000508142 408 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 TPRKBP2-201ENST00000565969 475 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC009032.1-201ENST00000617574 431 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MTND4P4-201ENST00000439033 1366 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MIR1-1-201ENST00000362147 71 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 SNORA80D-201ENST00000384488 135 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 RNU6-296P-201ENST00000384608 107 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 TXNL1P1-201ENST00000429528 554 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC022868.1-201ENST00000517767 391 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC022616.3-201ENST00000523940 148 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 TRAV32-201ENST00000553993 340 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 FTX_3.1-201ENST00000610451 147 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AL109659.3-201ENST00000624985 950 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 ELOCP9-201ENST00000418624 239 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 FAM204CP-201ENST00000424489 642 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MTND4LP10-201ENST00000435146 291 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 ACA59.2-201ENST00000517061 156 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MIR4300-201ENST00000581016 96 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 SNORA25.18-201ENST00000607153 114 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC004832.4-201ENST00000608952 331 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AL159972.1-201ENST00000625150 448 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC017104.5-201ENST00000637647 639 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 AC112487.2-201ENST00000637950 304 ntBASIC-0.42□□□□□ -2.48
VPS13DQ5THJ4 MIR892B-201ENST00000401279 77 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC092001.1-201ENST00000453012 261 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC114755.3-201ENST00000481111 251 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RNU6-848P-201ENST00000515948 107 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RNU6-617P-201ENST00000516147 107 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RNU6-473P-201ENST00000516164 107 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR4504-201ENST00000577413 92 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC104695.3-201ENST00000604052 296 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AL031176.1-201ENST00000604554 466 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR3529-201ENST00000637713 78 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR548H2-201ENST00000408874 88 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 SNORD60.2-201ENST00000516883 86 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC093023.1-201ENST00000547375 507 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR3976-201ENST00000606807 139 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR29B2-201ENST00000385055 81 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MTCO1P20-201ENST00000425366 358 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR4324-201ENST00000584846 72 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RN7SL660P-201ENST00000614852 299 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC006213.4-201ENST00000616184 634 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR6738-201ENST00000619620 64 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RNU6-944P-201ENST00000364023 107 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 SMIM11P1-201ENST00000369586 178 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 RNU6-480P-201ENST00000384332 107 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AL391840.1-201ENST00000571144 367 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 MIR4709-201ENST00000577272 72 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC239868.4-201ENST00000608318 671 ntBASIC-0.43□□□□□ -2.48
VPS13DQ5THJ4 AC007014.2-201ENST00000615581 479 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms