Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR5006-201ENST00000583027 110 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 FAM71BP1-201ENST00000604431 523 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 AL034555.1-201ENST00000604816 211 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 AC107068.1-201ENST00000563286 4218 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 AL136360.1-201ENST00000503377 1900 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 DHX9P1-201ENST00000436565 3076 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 Y_RNA.17-201ENST00000362433 111 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RNU1-83P-201ENST00000363426 164 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RNY4P6-201ENST00000363667 96 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP28-201ENST00000363841 119 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP366-201ENST00000365454 123 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP167-201ENST00000365461 116 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 SNORA70C-201ENST00000384538 135 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-279P-201ENST00000391297 101 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 PTMAP5-201ENST00000393073 333 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 SNORA19.1-201ENST00000410656 129 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AC073261.1-201ENST00000429409 121 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RPL23AP52-201ENST00000439311 478 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AC134698.5-201ENST00000519444 336 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 IGKV3-31-201ENST00000523109 329 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AC068339.1-201ENST00000526965 141 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RN7SL176P-201ENST00000580352 264 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AC113403.1-201ENST00000604910 193 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 AC112484.5-201ENST00000624189 228 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 MIR3653-201ENST00000625572 110 ntBASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
RNFT1Q5M7Z0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 Y_RNA.362-201ENST00000365518 110 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 MIR181B1-201ENST00000385240 110 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 RPL39P39-201ENST00000455840 151 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 SNRPGP5-201ENST00000456003 220 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AC022137.1-201ENST00000483735 151 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AC139453.2-201ENST00000487255 133 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AC026402.1-201ENST00000513642 170 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 MRPL49P2-201ENST00000521066 465 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AL451007.1-201ENST00000595491 289 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AC079587.1-201ENST00000603846 277 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AL137067.1-201ENST00000615933 120 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 uc_338.4-201ENST00000616635 176 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 uc_338.13-201ENST00000618243 179 ntBASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNFT1Q5M7Z0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 MIR548B-201ENST00000385247 97 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 MIR3065-201ENST00000390137 79 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 SNORA11F-201ENST00000408237 128 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AC007064.1-201ENST00000412238 351 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-893P-201ENST00000458841 100 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 RPL7AP28-201ENST00000464513 571 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AC010285.1-201ENST00000470580 392 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP367-201ENST00000516557 118 ntBASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNFT1Q5M7Z0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 Y_RNA.107-201ENST00000363190 121 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 Y_RNA.198-201ENST00000364013 98 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 SNORA18.2-201ENST00000383865 132 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 MIR325-201ENST00000385260 98 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-788P-201ENST00000390967 104 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AC008134.1-201ENST00000420943 193 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 RPL36AP10-201ENST00000421785 322 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms