Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 OTUD4P1-201ENST00000237841 3067 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NCBP3Q53F19 RNA5SP295-201ENST00000362655 121 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 RN7SKP103-201ENST00000363848 320 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 RNU6-409P-201ENST00000384114 104 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 RN7SL30P-201ENST00000488416 306 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 AC072052.1-201ENST00000496556 306 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 AP000867.2-201ENST00000532468 320 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.77□□□□□ -1.33
NCBP3Q53F19 MIR4777-201ENST00000583710 86 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 AC090115.4-201ENST00000609970 188 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 MIR6076-201ENST00000617521 113 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 MIR203B-201ENST00000636080 86 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.77□□□□□ -1.33
NCBP3Q53F19 AL031595.2-201ENST00000624215 19071 ntBASIC6.77□□□□□ -1.33
NCBP3Q53F19 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
NCBP3Q53F19 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NCBP3Q53F19 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 RNU1-72P-201ENST00000362976 153 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NCBP3Q53F19 RNU6-1274P-201ENST00000384557 107 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 U3.32-201ENST00000408116 212 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 MIR1183-201ENST00000408856 89 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 RNU6-1186P-201ENST00000410429 97 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 SNORA71B-202ENST00000439232 272 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 RPL30P14-201ENST00000482744 348 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 AC073073.1-201ENST00000493920 463 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 RNA5SP34-201ENST00000516887 130 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 AL513534.2-201ENST00000603836 250 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NCBP3Q53F19 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NCBP3Q53F19 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NCBP3Q53F19 AL360270.2-201ENST00000562952 5985 ntBASIC6.76□□□□□ -1.33
NCBP3Q53F19 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
NCBP3Q53F19 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC6.75□□□□□ -1.33
NCBP3Q53F19 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NCBP3Q53F19 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NCBP3Q53F19 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.75□□□□□ -1.33
NCBP3Q53F19 Y_RNA.37-201ENST00000362606 108 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 RNU6-363P-201ENST00000362895 105 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 Y_RNA.96-201ENST00000363092 109 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 RNU1-43P-201ENST00000365052 165 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 RNU6-652P-201ENST00000365488 107 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 MIR605-201ENST00000385078 83 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 MIR223-201ENST00000385204 110 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 AL139148.1-201ENST00000427122 680 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 RPS12P18-201ENST00000442381 270 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 SNRPGP3-201ENST00000469405 227 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 SNORD36C-201ENST00000516733 66 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 MIR1269B-201ENST00000580405 75 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 HSPE1P19-201ENST00000603327 295 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 AC091304.10-201ENST00000641554 121 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NCBP3Q53F19 UBE3AP2-201ENST00000429033 2259 ntBASIC6.75□□□□□ -1.33
NCBP3Q53F19 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NCBP3Q53F19 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NCBP3Q53F19 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.74□□□□□ -1.33
NCBP3Q53F19 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NCBP3Q53F19 RNU1-20P-201ENST00000363314 162 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 RN7SKP113-201ENST00000363891 295 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 SNORD115-28-201ENST00000363931 81 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC6.74□□□□□ -1.33
NCBP3Q53F19 AC025750.2-201ENST00000442609 450 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 BX284632.1-201ENST00000478218 541 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 RN7SL346P-201ENST00000491561 294 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 AC006445.1-201ENST00000491925 405 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 RNU7-25P-201ENST00000516544 62 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 AC044860.2-201ENST00000561005 179 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 AC006116.3-201ENST00000592968 361 ntBASIC6.74□□□□□ -1.33
NCBP3Q53F19 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NCBP3Q53F19 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NCBP3Q53F19 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 AC004656.1-201ENST00000568479 4951 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NCBP3Q53F19 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 RNU4-16P-201ENST00000364737 141 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 Y_RNA.351-201ENST00000365436 96 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 RNU6-171P-201ENST00000384354 107 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 MIR600-201ENST00000385007 98 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 RN7SKP16-201ENST00000410180 299 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 RPS29P9-201ENST00000440360 171 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 RN7SL41P-201ENST00000476144 297 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 Y_RNA.773-201ENST00000607168 90 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 DLEU2_5.2-201ENST00000610606 84 ntBASIC6.73□□□□□ -1.33
NCBP3Q53F19 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NCBP3Q53F19 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NCBP3Q53F19 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.73□□□□□ -1.33
NCBP3Q53F19 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 482.1 ms