Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC38Q502W7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC38Q502W7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC38Q502W7 RNU6-1059P-201ENST00000363752 98 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 RNU6-842P-201ENST00000384269 107 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 RNU6-378P-201ENST00000384324 107 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 RPS26P42-201ENST00000413485 326 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC38Q502W7 RPL23AP75-201ENST00000491601 451 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 Y_RNA.708-201ENST00000516950 96 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 CYCSP26-201ENST00000534107 320 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC38Q502W7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC38Q502W7 MIR5696-201ENST00000578474 85 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 AC011494.1-201ENST00000596454 237 ntBASIC2.71□□□□□ -1.98
CCDC38Q502W7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC38Q502W7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC38Q502W7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 RNU6-1009P-201ENST00000390996 107 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 SNORA12-201ENST00000391162 147 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AL356057.3-201ENST00000402607 340 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 MIR1294-201ENST00000408503 142 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 Y_RNA.594-201ENST00000410373 140 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 RNU6-1050P-201ENST00000410388 107 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 snoU13.6-201ENST00000458785 104 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 UBE2DNL-203ENST00000474922 222 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 FO393415.2-201ENST00000480085 343 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC068781.1-201ENST00000488231 618 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AF186996.7-201ENST00000492781 209 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 HSPE1P18-201ENST00000517602 280 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC009994.1-201ENST00000606889 253 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 AC104260.1-201ENST00000616660 539 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 SCARNA4-201ENST00000629045 128 ntBASIC2.7□□□□□ -1.98
CCDC38Q502W7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC38Q502W7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CCDC38Q502W7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC38Q502W7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC38Q502W7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC38Q502W7 RNU4-9P-201ENST00000364951 139 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 RNU1-148P-201ENST00000384472 162 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 RNA5SP21-201ENST00000410917 96 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AL358453.1-201ENST00000422522 250 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 ARL5AP4-201ENST00000430731 512 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AC107083.1-201ENST00000439643 279 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AC087477.1-201ENST00000465747 340 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 MTND4P17-201ENST00000470444 350 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AC132942.1-201ENST00000486753 483 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC38Q502W7 RN7SKP132-201ENST00000516001 208 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AC034114.1-201ENST00000520293 285 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC38Q502W7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC38Q502W7 MYL12BP1-201ENST00000569826 507 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 AC016727.1-205ENST00000605437 569 ntBASIC2.69□□□□□ -1.98
CCDC38Q502W7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC38Q502W7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC38Q502W7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC38Q502W7 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 RNU6-611P-201ENST00000384276 104 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 Y_RNA.474-201ENST00000384341 102 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 RNU2-48P-201ENST00000410694 191 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC38Q502W7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC38Q502W7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC38Q502W7 Y_RNA.670-201ENST00000516255 105 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC38Q502W7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 AC113139.1-201ENST00000605049 239 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 AP000654.2-201ENST00000605633 586 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 PISRT1.1-201ENST00000616930 107 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 AL132822.1-201ENST00000617063 513 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 AC098657.3-201ENST00000620434 263 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC38Q502W7 AC007336.1-201ENST00000576365 3828 ntBASIC2.68□□□□□ -1.98
CCDC38Q502W7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC38Q502W7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 RNU6-26P-201ENST00000383985 107 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 RNU4-14P-201ENST00000410858 122 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms