Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR653-201ENST00000385279 96 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 MTND4LP7-201ENST00000431728 294 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 EIF1P4-201ENST00000572664 335 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 AL357312.1-201ENST00000603879 298 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 RPL21P136-201ENST00000605378 396 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 AL162730.1-201ENST00000605734 292 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 AC027514.1-201ENST00000588561 1603 ntBASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
CCDC58Q4VC31 RNU6-853P-201ENST00000364306 107 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 RNU4-76P-201ENST00000364509 141 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 RPS3AP36-201ENST00000398190 775 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 RPL23AP50-201ENST00000434149 455 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 AL596276.1-201ENST00000434465 418 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 AC079776.3-201ENST00000450665 370 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 AC022447.4-201ENST00000504053 364 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 AK3P2-201ENST00000507976 429 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 MTND3P5-201ENST00000512798 333 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 AC073349.3-201ENST00000617616 186 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 AL157786.1-207ENST00000627771 695 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.19□□□□□ -2.44
CCDC58Q4VC31 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU5B-1-201ENST00000363286 116 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU6-793P-201ENST00000384233 104 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU6-177P-201ENST00000411257 104 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AL359704.1-201ENST00000411586 781 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 SNRPGP12-201ENST00000449481 213 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AC245047.8-201ENST00000456455 284 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AL139824.2-201ENST00000458731 1095 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU7-14P-201ENST00000459331 62 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNA5SP436-201ENST00000516020 115 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU6-150P-201ENST00000516237 95 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU4-77P-201ENST00000516692 156 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 RNU6-677P-201ENST00000516914 101 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AC021451.1-201ENST00000523498 1129 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 SUB1P2-201ENST00000556401 297 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AC021231.3-201ENST00000558497 370 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 SNRPGP20-201ENST00000604477 205 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 AL022154.1-201ENST00000604698 785 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 MIR4315-1-201ENST00000636800 73 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 MIR4315-2-201ENST00000640925 73 ntBASIC-0.2□□□□□ -2.44
CCDC58Q4VC31 MTND5P33-201ENST00000571250 1450 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 RNA5SP109-201ENST00000391010 116 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 RNA5SP504-201ENST00000410676 117 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 MRPS36P1-201ENST00000421291 307 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 RPL31P35-201ENST00000431058 377 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 MTCYBP39-201ENST00000437562 491 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC093534.1-201ENST00000504977 132 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 RNU1-86P-201ENST00000516108 154 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 RNU1-107P-201ENST00000516617 154 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC109446.1-201ENST00000566172 220 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC110760.3-201ENST00000598794 467 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC090186.1-201ENST00000605991 572 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC124016.2-201ENST00000610058 665 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC022709.1-201ENST00000615967 87 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC007742.2-201ENST00000618226 398 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AL513423.1-201ENST00000621695 132 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 AC010487.4-201ENST00000637027 61 ntBASIC-0.21□□□□□ -2.44
CCDC58Q4VC31 RNA5SP432-201ENST00000362480 116 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 SNORA33-201ENST00000363664 130 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 RNU6-877P-201ENST00000383868 107 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 RNU6-142P-201ENST00000384019 107 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 AL355796.1-201ENST00000406706 323 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 MTCYBP2-201ENST00000407745 171 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 AC010154.1-201ENST00000425857 269 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 DEFB130D-201ENST00000426866 237 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 ZNF886P-201ENST00000450781 723 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 DEFB108A-201ENST00000530110 222 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 AC090049.2-201ENST00000550377 109 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 SNORA4-201ENST00000584302 138 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 AL390123.1-201ENST00000603216 237 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 MIR6734-201ENST00000621166 68 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 AL603839.4-201ENST00000624658 1005 ntBASIC-0.22□□□□□ -2.44
CCDC58Q4VC31 MIR16-2-201ENST00000362117 81 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 SNORA42.1-201ENST00000363515 137 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 SNORD114-9-201ENST00000364370 72 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 RNU4-48P-201ENST00000365559 182 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AL451046.2-201ENST00000403074 277 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 BX664727.1-201ENST00000416024 466 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 AC027419.1-201ENST00000522976 328 ntBASIC-0.23□□□□□ -2.45
CCDC58Q4VC31 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 1502.7 ms