Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MIR583-201ENST00000384846 75 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 RNU6-1068P-201ENST00000410958 103 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.53□□□□□ -2.16
RFX4Q33E94 CBX3P6-201ENST00000430257 527 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 MTND3P16-201ENST00000452205 344 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 UBL5P3-201ENST00000475112 231 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.53□□□□□ -2.16
RFX4Q33E94 RNU6-991P-201ENST00000516168 107 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 Y_RNA.704-201ENST00000516851 102 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.53□□□□□ -2.16
RFX4Q33E94 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.53□□□□□ -2.16
RFX4Q33E94 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.53□□□□□ -2.16
RFX4Q33E94 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AC103987.3-201ENST00000582071 292 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 MIR5692C1-201ENST00000585309 91 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AC078795.3-201ENST00000602913 472 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AC009318.2-201ENST00000610917 651 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 AP000560.1-201ENST00000624150 1937 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RFX4Q33E94 RNU6-82P-201ENST00000363970 107 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 RNU6-522P-201ENST00000364497 107 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 Y_RNA.372-201ENST00000365599 102 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 RNU6-142P-201ENST00000384019 107 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 SNORA40.18-201ENST00000391200 128 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 RNA5SP212-201ENST00000391223 107 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 RNA5SP201-201ENST00000410316 124 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.52□□□□□ -2.17
RFX4Q33E94 AL133396.1-201ENST00000432048 687 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 MTCO2P3-201ENST00000442543 421 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 RNU6-1208P-201ENST00000459588 107 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 TRAV32-201ENST00000553993 340 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 AL512360.1-201ENST00000555346 234 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.52□□□□□ -2.17
RFX4Q33E94 AC022254.1-201ENST00000567857 235 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 MIR3136-201ENST00000583498 78 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 BNIP3P25-201ENST00000596023 559 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 AC092807.2-201ENST00000609367 243 ntBASIC1.52□□□□□ -2.17
RFX4Q33E94 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RFX4Q33E94 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RFX4Q33E94 Y_RNA.436-201ENST00000384097 102 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 Y_RNA.481-201ENST00000384373 102 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 SNORD14D-201ENST00000384390 87 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 MIR597-201ENST00000384968 97 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 BTF3L4P2-201ENST00000392798 346 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 MTCYBP2-201ENST00000407745 171 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 SNORA11.2-201ENST00000408318 127 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.51□□□□□ -2.17
RFX4Q33E94 AC078809.1-201ENST00000427601 140 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 TIMM9P3-201ENST00000428659 274 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 MTND2P29-201ENST00000438595 412 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.51□□□□□ -2.17
RFX4Q33E94 Y_RNA.654-201ENST00000497848 106 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC104576.1-201ENST00000524225 88 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC025423.5-201ENST00000550230 219 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 MIR4713-201ENST00000582691 75 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
RFX4Q33E94 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC093783.1-201ENST00000612976 329 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 FAM157A-202ENST00000615155 405 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC005858.4-201ENST00000623191 700 ntBASIC1.51□□□□□ -2.17
RFX4Q33E94 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.51□□□□□ -2.17
RFX4Q33E94 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
RFX4Q33E94 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RFX4Q33E94 RNU6-483P-201ENST00000384088 108 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 Y_RNA.517-201ENST00000384551 106 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 RNU6-908P-201ENST00000410160 94 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AP000275.1-201ENST00000411943 390 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 SRIP3-201ENST00000413200 219 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 VN1R36P-201ENST00000414936 291 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.5□□□□□ -2.17
RFX4Q33E94 AL589823.1-201ENST00000429577 183 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.5□□□□□ -2.17
RFX4Q33E94 RPS29P27-201ENST00000463711 170 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.5□□□□□ -2.17
RFX4Q33E94 AC096745.1-201ENST00000509945 370 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.5□□□□□ -2.17
RFX4Q33E94 RNU6-323P-201ENST00000521915 107 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AL356157.2-201ENST00000605122 111 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AF250324.2-201ENST00000608299 610 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AC073534.2-201ENST00000620377 381 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
RFX4Q33E94 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RFX4Q33E94 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RFX4Q33E94 MTND4P23-201ENST00000447723 1363 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AC092268.1-201ENST00000342691 405 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 Y_RNA.504-201ENST00000384481 104 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.49□□□□□ -2.17
RFX4Q33E94 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AL590556.1-201ENST00000423231 483 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 HMGN2P3-201ENST00000433603 273 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 HMGN2P5-201ENST00000436882 273 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 RPL23AP63-201ENST00000498752 471 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AC008834.1-201ENST00000511612 175 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms