Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AP004217.1-201ENST00000480579 346 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 RN7SL499P-201ENST00000481141 276 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 RPL23AP70-201ENST00000483361 460 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AC090096.1-201ENST00000489168 390 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AF186996.7-201ENST00000492781 209 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 SNORA25.11-201ENST00000515935 105 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 RNU6-120P-201ENST00000516077 103 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 RNU7-4P-201ENST00000516961 62 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 SNORD116.3-201ENST00000517176 78 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.44□□□□□ -2.02
EFNB3Q15768 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.44□□□□□ -2.02
EFNB3Q15768 AC023442.1-201ENST00000531247 422 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AC020661.2-201ENST00000560114 134 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.44□□□□□ -2.02
EFNB3Q15768 SNRPGP17-201ENST00000603780 214 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AL034555.1-201ENST00000604816 211 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AC100812.1-201ENST00000607622 580 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 RMST_6.1-201ENST00000611980 203 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.44□□□□□ -2.02
EFNB3Q15768 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 AC007742.2-201ENST00000618226 398 ntBASIC2.44□□□□□ -2.02
EFNB3Q15768 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
EFNB3Q15768 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
EFNB3Q15768 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
EFNB3Q15768 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.44□□□□□ -2.02
EFNB3Q15768 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.44□□□□□ -2.02
EFNB3Q15768 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
EFNB3Q15768 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
EFNB3Q15768 RNU1-115P-201ENST00000365329 160 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 SNORA36A-201ENST00000384221 132 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 MIR625-201ENST00000385047 85 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 SNORA12.2-201ENST00000391040 156 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AL590004.1-201ENST00000405321 300 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 U6atac.2-201ENST00000408644 118 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 RNU6-1328P-201ENST00000410938 106 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 HMGN2P35-201ENST00000412164 270 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 RPS26P42-201ENST00000413485 326 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AC012306.1-201ENST00000423267 114 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AC008267.5-201ENST00000424928 265 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.43□□□□□ -2.02
EFNB3Q15768 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.43□□□□□ -2.02
EFNB3Q15768 AC087477.1-201ENST00000465747 340 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AC021146.2-201ENST00000504736 556 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 RNA5SP356-201ENST00000515972 94 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 SNORA31.16-201ENST00000516773 139 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 SCARNA3-201ENST00000517097 143 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 MIR3171-201ENST00000584270 74 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 Z98751.3-201ENST00000604447 521 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.43□□□□□ -2.02
EFNB3Q15768 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AC091925.1-201ENST00000623204 462 ntBASIC2.43□□□□□ -2.02
EFNB3Q15768 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.43□□□□□ -2.02
EFNB3Q15768 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.43□□□□□ -2.02
EFNB3Q15768 AC009487.2-201ENST00000420969 6821 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
EFNB3Q15768 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EFNB3Q15768 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.28-201ENST00000362554 111 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 RNU6-1159P-201ENST00000362933 107 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.405-201ENST00000383979 100 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 SNORA18.3-201ENST00000384122 132 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.451-201ENST00000384200 100 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.524-201ENST00000384564 100 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.561-201ENST00000384694 100 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
EFNB3Q15768 RNU6-1156P-201ENST00000410365 100 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.42□□□□□ -2.02
EFNB3Q15768 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.42□□□□□ -2.02
EFNB3Q15768 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.42□□□□□ -2.02
EFNB3Q15768 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.42□□□□□ -2.02
EFNB3Q15768 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.42□□□□□ -2.02
EFNB3Q15768 RPS3P1-201ENST00000456781 192 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.42□□□□□ -2.02
EFNB3Q15768 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.661-201ENST00000516003 99 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.706-201ENST00000516933 99 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 Y_RNA.711-201ENST00000516993 102 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.42□□□□□ -2.02
EFNB3Q15768 COX6CP5-201ENST00000527162 228 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 CYP4A27P-201ENST00000567218 190 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 MIR3923-201ENST00000579521 83 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 AC010928.2-201ENST00000588017 287 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 AL078605.1-201ENST00000603529 500 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.42□□□□□ -2.02
EFNB3Q15768 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.42□□□□□ -2.02
EFNB3Q15768 AC135776.4-201ENST00000624300 1904 ntBASIC2.42□□□□□ -2.02
EFNB3Q15768 AC080128.1-201ENST00000474389 1917 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 VTRNA1-1-201ENST00000363120 99 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 Y_RNA.202-201ENST00000364083 110 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 MIR9-1-201ENST00000385198 89 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 MIR153-2-201ENST00000385225 87 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 MIR190B-201ENST00000401119 79 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
EFNB3Q15768 PMCHL1-202ENST00000423102 261 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 RPL30P4-201ENST00000429309 333 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 AC092423.1-201ENST00000430165 186 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 MTCO3P29-201ENST00000432119 779 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 Z82188.1-201ENST00000436709 154 ntBASIC2.41□□□□□ -2.02
EFNB3Q15768 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms