Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AL030996.1-201ENST00000411430 235 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AC139712.2-201ENST00000424302 339 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 MTCO1P20-201ENST00000425366 358 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AL021397.1-201ENST00000451806 248 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AP001486.1-201ENST00000463339 476 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 MTCO1P29-201ENST00000496868 288 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 RN7SL636P-201ENST00000497504 294 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AC234781.5-201ENST00000508429 271 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AP005639.2-201ENST00000527592 928 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN1BQ07699 AC026371.1-201ENST00000551867 419 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN1BQ07699 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.96□□□□□ -2.1
SCN1BQ07699 AC100830.2-201ENST00000581636 240 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AC146944.4-201ENST00000602697 718 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN1BQ07699 AC104458.1-201ENST00000608243 463 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 MIR6766-201ENST00000622641 72 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN1BQ07699 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SCN1BQ07699 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SCN1BQ07699 AC016717.2-201ENST00000609089 5141 ntBASIC1.96□□□□□ -2.1
SCN1BQ07699 RNU1-76P-201ENST00000362903 159 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 RNU6-623P-201ENST00000363143 105 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 RNU6-254P-201ENST00000363377 107 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 SNORA18.2-201ENST00000383865 132 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCN1BQ07699 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCN1BQ07699 SNORA12.2-201ENST00000391040 156 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.95□□□□□ -2.1
SCN1BQ07699 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN1BQ07699 MTND3P21-201ENST00000433774 331 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 USP9YP28-201ENST00000435142 589 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN1BQ07699 HMGN2P26-201ENST00000463169 339 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 AC008413.1-201ENST00000511864 177 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 RNVU1-2-201ENST00000516326 135 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 AC016256.1-201ENST00000547971 354 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 ZNF519P2-201ENST00000557032 169 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN1BQ07699 AC006023.1-201ENST00000603944 259 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 AC091932.3-201ENST00000624223 323 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN1BQ07699 AL136360.1-201ENST00000503377 1900 ntBASIC1.95□□□□□ -2.1
SCN1BQ07699 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCN1BQ07699 MIR340-201ENST00000362125 95 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 U3.12-201ENST00000364498 214 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 Y_RNA.256-201ENST00000364594 104 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN1BQ07699 RNU6-1286P-201ENST00000383871 107 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 RNU6-968P-201ENST00000384076 107 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 RNU6-1026P-201ENST00000384465 108 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AL356432.1-201ENST00000405809 419 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 RNA5SP494-201ENST00000410653 129 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 EIF4EP2-201ENST00000422816 654 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN1BQ07699 NDUFA5P4-201ENST00000436704 385 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN1BQ07699 AC130509.1-201ENST00000464158 433 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.94□□□□□ -2.1
SCN1BQ07699 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN1BQ07699 DEFB131C-201ENST00000528817 165 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AC087441.2-201ENST00000529141 262 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCN1BQ07699 MRPS36P4-201ENST00000534436 298 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN1BQ07699 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
SCN1BQ07699 RMST_3.1-201ENST00000611651 109 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 AC005296.1-201ENST00000616145 209 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 DUXAP9-208ENST00000622815 614 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.94□□□□□ -2.1
SCN1BQ07699 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN1BQ07699 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SCN1BQ07699 SNORD113-7-201ENST00000363762 77 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 SNORD31B-201ENST00000364977 69 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SCN1BQ07699 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 NDUFB4P4-201ENST00000404822 243 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 AC027124.2-201ENST00000428249 105 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN1BQ07699 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 RNU7-187P-201ENST00000458985 68 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN1BQ07699 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN1BQ07699 AC109635.3-201ENST00000529536 185 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 AC016957.1-201ENST00000534895 309 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 MIR3976-201ENST00000606807 139 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.93□□□□□ -2.1
SCN1BQ07699 MIR8076-201ENST00000611401 83 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.93□□□□□ -2.1
SCN1BQ07699 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN1BQ07699 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCN1BQ07699 AC233981.2-201ENST00000611524 1614 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms