| PAX8 | Q06710 | EIF4EP2-201 | ENST00000422816 | 654 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL358075.3-201 | ENST00000426289 | 226 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC093083.1-201 | ENST00000438633 | 347 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RPS15AP7-201 | ENST00000439294 | 405 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL442638.1-201 | ENST00000443359 | 237 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RPL39P29-201 | ENST00000447779 | 157 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SNRPGP7-201 | ENST00000469016 | 106 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SRIP1-201 | ENST00000489235 | 288 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1170P-201 | ENST00000515974 | 106 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MRPS36P4-201 | ENST00000534436 | 298 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL136038.2-201 | ENST00000553983 | 283 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | ZNF616-202 | ENST00000596290 | 568 nt | TSL 4 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC013412.1-201 | ENST00000610687 | 192 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC133104.2-201 | ENST00000615272 | 193 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL161782.1-201 | ENST00000622930 | 586 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | NCBP1-205 | ENST00000629069 | 249 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MT-ND4-201 | ENST00000361381 | 1378 nt | APPRIS P1 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | E2F5-208 | ENST00000521429 | 1551 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MTND5P30-201 | ENST00000452896 | 1731 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL109809.4-201 | ENST00000603520 | 2185 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | Y_RNA.40-201 | ENST00000362645 | 93 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1285P-201 | ENST00000363480 | 105 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | Y_RNA.197-201 | ENST00000364004 | 102 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1040P-201 | ENST00000383974 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1227P-201 | ENST00000383981 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1011P-201 | ENST00000384668 | 107 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SNORA41-201 | ENST00000384675 | 132 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | HMGN2P35-201 | ENST00000412164 | 270 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC083867.1-201 | ENST00000413567 | 457 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC010731.2-201 | ENST00000415275 | 440 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | Z98742.2-201 | ENST00000431564 | 187 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC091133.1-201 | ENST00000435491 | 483 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | LINC01549-201 | ENST00000440664 | 714 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MTCYBP6-201 | ENST00000441810 | 138 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | LINC01628-201 | ENST00000444266 | 397 nt | TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL138900.1-201 | ENST00000449345 | 399 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL441985.1-201 | ENST00000457727 | 251 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC022493.2-201 | ENST00000506122 | 481 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-470P-201 | ENST00000515954 | 104 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC091544.4-201 | ENST00000555268 | 342 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC018554.1-202 | ENST00000565133 | 444 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MIR5092-201 | ENST00000583139 | 88 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC005899.2-201 | ENST00000584353 | 90 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC060766.3-201 | ENST00000591442 | 263 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | uc_338.14-201 | ENST00000613162 | 166 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL159153.1-201 | ENST00000619688 | 317 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | TTC6-201 | ENST00000267368 | 1681 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MTND5P9-201 | ENST00000503854 | 1755 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SMARCAD1-206 | ENST00000509418 | 2348 nt | TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC111000.4-202 | ENST00000505646 | 2648 nt | TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | ERBIN-202 | ENST00000380935 | 6692 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | CCDC66-201 | ENST00000326595 | 3027 nt | APPRIS P3 TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | MIR6073-201 | ENST00000352083 | 89 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | Y_RNA.31-201 | ENST00000362574 | 102 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1141P-201 | ENST00000364520 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | Y_RNA.395-201 | ENST00000383945 | 109 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNA5SP210-201 | ENST00000391034 | 120 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU2-23P-201 | ENST00000410545 | 195 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1328P-201 | ENST00000410938 | 106 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SNRPG-202 | ENST00000413456 | 398 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL356010.2-201 | ENST00000422844 | 197 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL353997.1-201 | ENST00000432936 | 108 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RPL23AP50-201 | ENST00000434149 | 455 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL359853.2-201 | ENST00000442108 | 353 nt | TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SNRPG-205 | ENST00000449935 | 428 nt | TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | TSPY5P-202 | ENST00000456541 | 142 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC112771.1-201 | ENST00000463581 | 102 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC063944.1-201 | ENST00000496943 | 295 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SNORA25.11-201 | ENST00000515935 | 105 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AP000755.2-201 | ENST00000526777 | 571 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | HSPE1P4-201 | ENST00000550617 | 308 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC020661.2-201 | ENST00000560114 | 134 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | FGF7-202 | ENST00000560270 | 1688 nt | TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | SNORD53-201 | ENST00000579969 | 78 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC012594.1-269 | ENST00000600489 | 628 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | B3GNTL1P2-201 | ENST00000603673 | 288 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL353621.2-201 | ENST00000605340 | 133 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | uc_338.22-201 | ENST00000622722 | 187 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AL450472.1-202 | ENST00000637286 | 180 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC099654.10-201 | ENST00000640395 | 161 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | PARPBP-201 | ENST00000327680 | 3014 nt | APPRIS P1 TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | ANKAR-201 | ENST00000313581 | 4391 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | ZNF404-202 | ENST00000587539 | 1851 nt | APPRIS P2 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | ZNF299P-201 | ENST00000406845 | 1804 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | OGN-201 | ENST00000262551 | 2971 nt | APPRIS P1 TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | APCS-201 | ENST00000255040 | 926 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | Y_RNA.5-201 | ENST00000362334 | 102 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| PAX8 | Q06710 | RNY1P16-201 | ENST00000363063 | 111 nt | BASIC | 2.03 | □□□□□ -2.08 | | |