Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 LINC02555-201ENST00000563933 1951 ntBASIC1.92□□□□□ -2.1
UBXN1Q04323 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UBXN1Q04323 Y_RNA.372-201ENST00000365599 102 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.91□□□□□ -2.1
UBXN1Q04323 RNA5SP219-201ENST00000390940 113 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 SNORD37.1-201ENST00000390968 65 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 RNU6-648P-201ENST00000410190 107 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 VN1R36P-201ENST00000414936 291 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AL645568.3-201ENST00000433683 316 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 MTND1P1-201ENST00000445453 368 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
UBXN1Q04323 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 Y_RNA.704-201ENST00000516851 102 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AC087441.2-201ENST00000529141 262 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AK6P1-201ENST00000540219 478 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AL512360.1-201ENST00000555346 234 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 MIR3923-201ENST00000579521 83 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 VN1R80P-201ENST00000597126 338 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AC116312.1-201ENST00000606841 314 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
UBXN1Q04323 AF250324.2-201ENST00000608299 610 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 AC087241.4-201ENST00000612441 480 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
UBXN1Q04323 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
UBXN1Q04323 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
UBXN1Q04323 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
UBXN1Q04323 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
UBXN1Q04323 RNU6-623P-201ENST00000363143 105 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 SNORD114-6-201ENST00000364393 72 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 Y_RNA.378-201ENST00000365652 113 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 Y_RNA.481-201ENST00000384373 102 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 MIR634-201ENST00000385208 97 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
UBXN1Q04323 RPL17P50-201ENST00000396131 546 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 RN7SKP192-201ENST00000411291 327 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.9□□□□□ -2.11
UBXN1Q04323 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 TPTE2P5-203ENST00000458118 728 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.9□□□□□ -2.11
UBXN1Q04323 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 CENPUP1-201ENST00000526649 1202 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.9□□□□□ -2.11
UBXN1Q04323 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.9□□□□□ -2.11
UBXN1Q04323 AC104581.2-201ENST00000572227 430 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 MIR4648-201ENST00000580107 72 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AC078795.3-201ENST00000602913 472 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AC010900.2-201ENST00000604508 210 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AP001836.1-201ENST00000604675 523 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AC015540.1-201ENST00000615828 501 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 AC099654.12-201ENST00000639868 649 ntBASIC1.9□□□□□ -2.11
UBXN1Q04323 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.9□□□□□ -2.11
UBXN1Q04323 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UBXN1Q04323 U3.9-201ENST00000363823 204 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 SNORD116-4-201ENST00000384733 96 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 AC123900.1-201ENST00000420390 96 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.89□□□□□ -2.11
UBXN1Q04323 AC130509.1-201ENST00000464158 433 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.89□□□□□ -2.11
UBXN1Q04323 AC010486.1-201ENST00000511793 424 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 RNU6-85P-201ENST00000605989 107 ntBASIC1.89□□□□□ -2.11
UBXN1Q04323 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
UBXN1Q04323 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
UBXN1Q04323 RNU4-66P-201ENST00000365199 138 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 RNU6-483P-201ENST00000384088 108 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 RNU6-1068P-201ENST00000410958 103 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.88□□□□□ -2.11
UBXN1Q04323 NCOR1P3-201ENST00000420479 303 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.88□□□□□ -2.11
UBXN1Q04323 TIMM9P3-201ENST00000428659 274 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 MTND3P16-201ENST00000452205 344 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
UBXN1Q04323 UBE2DNL-203ENST00000474922 222 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 SNORA14.1-201ENST00000516113 141 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 RNU6-506P-201ENST00000516553 94 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 RNU6-567P-201ENST00000516746 107 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.88□□□□□ -2.11
UBXN1Q04323 HMGB1P33-201ENST00000563485 527 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
UBXN1Q04323 AC103705.1-201ENST00000619013 241 ntBASIC1.88□□□□□ -2.11
UBXN1Q04323 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBXN1Q04323 Y_RNA.167-201ENST00000363735 109 ntBASIC1.87□□□□□ -2.11
UBXN1Q04323 Y_RNA.504-201ENST00000384481 104 ntBASIC1.87□□□□□ -2.11
UBXN1Q04323 MIR514A2-201ENST00000385131 88 ntBASIC1.87□□□□□ -2.11
UBXN1Q04323 MIR514A3-201ENST00000385132 88 ntBASIC1.87□□□□□ -2.11
UBXN1Q04323 SNORD73A-201ENST00000386062 65 ntBASIC1.87□□□□□ -2.11
UBXN1Q04323 RNU6-908P-201ENST00000410160 94 ntBASIC1.87□□□□□ -2.11
UBXN1Q04323 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.87□□□□□ -2.11
UBXN1Q04323 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms