Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AP003122.4-201ENST00000530980 758 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 BNIP3P6-201ENST00000549284 499 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AC091489.2-201ENST00000566263 604 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 MIR4999-201ENST00000585029 91 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AL031281.1-201ENST00000604049 488 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AP000240.1-201ENST00000609910 452 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AC092106.3-201ENST00000611308 722 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AL139418.1-201ENST00000613613 177 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1BQ00975 RNU6-371P-201ENST00000364283 108 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 RNU6-1164P-201ENST00000364428 107 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 MIR597-201ENST00000384968 97 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 MIR122-201ENST00000385044 85 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1BQ00975 MTCO1P44-201ENST00000441935 243 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AL360271.2-201ENST00000447710 161 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1BQ00975 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1BQ00975 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1BQ00975 MIR5697-201ENST00000578045 78 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 MIR4514-201ENST00000581410 57 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 HMGN1P30-201ENST00000589286 268 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 AC027807.2-201ENST00000616099 408 ntBASIC0.67□□□□□ -2.3
CACNA1BQ00975 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.67□□□□□ -2.3
CACNA1BQ00975 MIR544A-201ENST00000384855 91 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 MIR1267-201ENST00000408723 78 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNU2-36P-201ENST00000410361 191 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNA5SP100-201ENST00000410903 110 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNA5SP59-201ENST00000410922 110 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AL591043.1-201ENST00000432461 424 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC069257.2-201ENST00000441819 155 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 RPL31P3-201ENST00000458430 332 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC093259.1-201ENST00000509755 300 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 SNORA43.2-201ENST00000516652 128 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AL590240.4-201ENST00000616908 390 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AL607023.1-201ENST00000620045 248 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC093648.1-201ENST00000623546 606 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNU6-414P-201ENST00000363705 104 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNU4-56P-201ENST00000364700 142 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 Y_RNA.332-201ENST00000365271 113 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNU6-142P-201ENST00000384019 107 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 RNU6-190P-201ENST00000384154 102 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 MTND1P20-201ENST00000430341 950 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 USP9YP17-201ENST00000444617 696 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC074344.1-201ENST00000512823 224 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 PCMTD1P2-201ENST00000565017 355 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AL139286.2-201ENST00000606838 396 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.66□□□□□ -2.3
CACNA1BQ00975 uc_338.11-201ENST00000619132 160 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 AC024940.5-201ENST00000622889 474 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 U4.7-201ENST00000638126 106 ntBASIC0.66□□□□□ -2.3
CACNA1BQ00975 MIR30A-201ENST00000385092 71 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 MRPL42P2-201ENST00000403169 426 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 NCOR1P3-201ENST00000420479 303 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC005908.1-201ENST00000468701 347 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC091951.3-201ENST00000504093 246 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 RNU6-685P-201ENST00000517088 95 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 MIR4305-201ENST00000583252 102 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC009878.1-201ENST00000621819 340 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC097372.5-201ENST00000623665 376 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.65□□□□□ -2.3
CACNA1BQ00975 AC008993.2-201ENST00000631744 806 ntBASIC0.65□□□□□ -2.3
CACNA1BQ00975 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CACNA1BQ00975 RNU6-23P-201ENST00000363283 107 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 RNU6-1179P-201ENST00000384667 107 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.65□□□□□ -2.31
CACNA1BQ00975 RNA5SP269-201ENST00000459032 137 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 AP003461.1-201ENST00000528866 78 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 MIR3923-201ENST00000579521 83 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 MIR5692A1-201ENST00000580523 69 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.65□□□□□ -2.31
CACNA1BQ00975 AC091135.1-201ENST00000585943 307 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 AP002360.4-201ENST00000606980 481 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 RMST_7.1-201ENST00000621935 268 ntBASIC0.65□□□□□ -2.31
CACNA1BQ00975 RNU6-862P-201ENST00000362804 105 ntBASIC0.64□□□□□ -2.31
CACNA1BQ00975 Y_RNA.67-201ENST00000362870 100 ntBASIC0.64□□□□□ -2.31
CACNA1BQ00975 RNU6-338P-201ENST00000383888 105 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms