Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC108078.1-201ENST00000508073 725 ntBASIC1.28□□□□□ -2.2
CDK5Q00535 AC005741.1-201ENST00000511094 432 ntBASIC1.28□□□□□ -2.2
CDK5Q00535 RNU6-295P-201ENST00000516901 104 ntBASIC1.28□□□□□ -2.2
CDK5Q00535 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.28□□□□□ -2.2
CDK5Q00535 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.28□□□□□ -2.2
CDK5Q00535 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.28□□□□□ -2.2
CDK5Q00535 Z98751.3-201ENST00000604447 521 ntBASIC1.28□□□□□ -2.2
CDK5Q00535 AC010900.2-201ENST00000604508 210 ntBASIC1.28□□□□□ -2.2
CDK5Q00535 PCGEM1.1-201ENST00000613431 131 ntBASIC1.28□□□□□ -2.2
CDK5Q00535 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.28□□□□□ -2.2
CDK5Q00535 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CDK5Q00535 Y_RNA.381-201ENST00000365666 102 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 SNORA36A-201ENST00000384221 132 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 SNORD73A-201ENST00000386062 65 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CDK5Q00535 MTCO3P46-201ENST00000425787 232 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.27□□□□□ -2.21
CDK5Q00535 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.27□□□□□ -2.21
CDK5Q00535 AC002486.1-201ENST00000435098 391 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AL357134.1-201ENST00000445848 426 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 MTCO2P18-201ENST00000457151 658 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 RNU1-131P-201ENST00000458943 161 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 RNU7-138P-201ENST00000459479 64 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AC130509.1-201ENST00000464158 433 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AL163973.1-201ENST00000484753 577 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 FAM206BP-201ENST00000510179 541 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AC091133.4-201ENST00000511142 308 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.27□□□□□ -2.21
CDK5Q00535 AC010493.1-201ENST00000513479 292 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.27□□□□□ -2.21
CDK5Q00535 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AC109446.1-201ENST00000566172 220 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 MIR3923-201ENST00000579521 83 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AC004223.2-201ENST00000590309 544 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 AC011494.1-201ENST00000596454 237 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.27□□□□□ -2.21
CDK5Q00535 ELL2P3-201ENST00000457883 1602 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CDK5Q00535 Y_RNA.77-201ENST00000362962 107 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 RNU6-60P-201ENST00000364792 103 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 RNA5SP126-201ENST00000365092 109 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 RNU6-378P-201ENST00000384324 107 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 Y_RNA.504-201ENST00000384481 104 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 RNA5SP219-201ENST00000390940 113 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 SNORA26.9-201ENST00000391322 122 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.26□□□□□ -2.21
CDK5Q00535 AC123900.1-201ENST00000420390 96 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC007677.1-201ENST00000445757 515 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 TPT1P7-201ENST00000458300 517 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.26□□□□□ -2.21
CDK5Q00535 AC021146.2-201ENST00000504736 556 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC010424.1-201ENST00000506336 297 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC010486.3-201ENST00000511602 785 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 RPL23AP94-201ENST00000512518 302 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 RN7SKP298-201ENST00000515950 94 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 SNORA40.12-201ENST00000516329 111 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC021231.3-201ENST00000558497 370 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.26□□□□□ -2.21
CDK5Q00535 CYP4A27P-201ENST00000567218 190 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.26□□□□□ -2.21
CDK5Q00535 AC005786.1-201ENST00000588553 154 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 VN1R80P-201ENST00000597126 338 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC119751.7-201ENST00000600494 245 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC009994.1-201ENST00000606889 253 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC013412.1-201ENST00000610687 192 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC005520.5-201ENST00000613926 164 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AL354950.2-201ENST00000617939 290 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.26□□□□□ -2.21
CDK5Q00535 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.26□□□□□ -2.21
CDK5Q00535 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.26□□□□□ -2.21
CDK5Q00535 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
CDK5Q00535 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDK5Q00535 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDK5Q00535 Y_RNA.1-201ENST00000352915 104 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 U3.9-201ENST00000363823 204 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 Y_RNA.255-201ENST00000364581 97 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 Y_RNA.359-201ENST00000365498 102 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 SNORA32.2-201ENST00000384049 122 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 SNORA12.2-201ENST00000391040 156 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 AL606923.1-201ENST00000406616 190 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 RNU2-41P-201ENST00000410991 178 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 MTCO3P41-201ENST00000414801 328 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 CDK8P2-201ENST00000415020 547 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 MTCO2P3-201ENST00000442543 421 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.25□□□□□ -2.21
CDK5Q00535 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.25□□□□□ -2.21
CDK5Q00535 HMGN2P23-201ENST00000456759 269 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 RPS3AP17-201ENST00000472594 777 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 AC010409.1-201ENST00000487382 476 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 AC008628.2-201ENST00000502605 298 ntBASIC1.25□□□□□ -2.21
CDK5Q00535 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.25□□□□□ -2.21
CDK5Q00535 AC079140.3-201ENST00000511111 550 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms