Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU6-108P-201ENST00000365558 107 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.47□□□□□ -2.17
CCNA1P78396 AL669831.1-202ENST00000428504 417 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.47□□□□□ -2.17
CCNA1P78396 GTF2IP13-201ENST00000438487 386 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.47□□□□□ -2.17
CCNA1P78396 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.47□□□□□ -2.17
CCNA1P78396 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCNA1P78396 HMGN2P18-201ENST00000450680 270 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AC130509.1-201ENST00000464158 433 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.47□□□□□ -2.17
CCNA1P78396 AC074344.1-201ENST00000512823 224 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AP001893.2-201ENST00000526949 202 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AP003033.1-201ENST00000527244 415 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AP003072.2-201ENST00000527756 676 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 MIR3913-1-201ENST00000577744 102 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AC245014.2-201ENST00000603689 287 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 Z94722.1-201ENST00000604328 474 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AC246785.4-201ENST00000605374 287 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AC006566.1-201ENST00000608943 513 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AC063944.3-201ENST00000609969 533 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 Z69720.2-201ENST00000624755 279 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 SEPT14P19-203ENST00000633205 211 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 AL133216.2-202ENST00000634512 349 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 SNORD32B-201ENST00000364460 84 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 RNU4-56P-201ENST00000364700 142 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 RNU6-456P-201ENST00000384493 107 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AC068050.1-201ENST00000394891 380 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 RPL30P13-201ENST00000418873 348 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AC133104.1-201ENST00000429100 218 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AL596276.1-201ENST00000434465 418 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 UBE2V1P8-201ENST00000437166 265 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.46□□□□□ -2.18
CCNA1P78396 RNU7-182P-201ENST00000459009 62 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AC099513.1-201ENST00000490423 301 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.46□□□□□ -2.18
CCNA1P78396 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.46□□□□□ -2.18
CCNA1P78396 SNORD60.2-201ENST00000516883 86 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AP003034.1-201ENST00000534621 422 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.46□□□□□ -2.18
CCNA1P78396 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.46□□□□□ -2.18
CCNA1P78396 MIR4703-201ENST00000577728 79 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 MIR4775-201ENST00000581168 75 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.46□□□□□ -2.18
CCNA1P78396 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.46□□□□□ -2.18
CCNA1P78396 AL034555.1-201ENST00000604816 211 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 AC104073.3-201ENST00000610942 955 ntBASIC1.46□□□□□ -2.18
CCNA1P78396 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCNA1P78396 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CCNA1P78396 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCNA1P78396 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-37P-201ENST00000362692 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-1097P-201ENST00000363586 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-11P-201ENST00000364234 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 SNORD114-6-201ENST00000364393 72 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 Y_RNA.255-201ENST00000364581 97 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 Y_RNA.324-201ENST00000365165 102 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-25P-201ENST00000383873 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-48P-201ENST00000384161 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-16P-201ENST00000384385 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-15P-201ENST00000384534 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-29P-201ENST00000384637 107 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU2-9P-201ENST00000410194 145 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 AC123900.1-201ENST00000420390 96 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCNA1P78396 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.45□□□□□ -2.18
CCNA1P78396 RNA5SP269-201ENST00000459032 137 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 COX6CP14-201ENST00000469580 174 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 MTND3P5-201ENST00000512798 333 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.45□□□□□ -2.18
CCNA1P78396 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 SUMO2P18-201ENST00000518873 252 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 AC008945.2-201ENST00000606056 604 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.45□□□□□ -2.18
CCNA1P78396 MIR6734-201ENST00000621166 68 ntBASIC1.45□□□□□ -2.18
CCNA1P78396 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.44□□□□□ -2.18
CCNA1P78396 RNU6-105P-201ENST00000363909 104 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 RNU6-142P-201ENST00000384019 107 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 RNU4-46P-201ENST00000410818 138 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 RN7SKP142-201ENST00000411236 328 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 MTCO3P46-201ENST00000425787 232 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 SDAD1P3-201ENST00000427380 333 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 AL358934.1-201ENST00000432346 324 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.44□□□□□ -2.18
CCNA1P78396 MTND1P27-201ENST00000451117 902 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 SNRPGP7-201ENST00000469016 106 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 FO393415.2-201ENST00000480085 343 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 AC104136.1-201ENST00000512969 394 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCNA1P78396 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.44□□□□□ -2.18
CCNA1P78396 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
CCNA1P78396 U4.7-201ENST00000638126 106 ntBASIC1.44□□□□□ -2.18
CCNA1P78396 MTND5P9-201ENST00000503854 1755 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms