Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.37□□□□□ -2.19
VSX2P58304 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.37□□□□□ -2.19
VSX2P58304 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.37□□□□□ -2.19
VSX2P58304 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.37□□□□□ -2.19
VSX2P58304 AL161670.1-201ENST00000554348 137 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.37□□□□□ -2.19
VSX2P58304 MIR3198-2-201ENST00000577868 80 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RSL24D1P11-201ENST00000591045 491 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AP000654.2-201ENST00000605633 586 ntBASIC1.37□□□□□ -2.19
VSX2P58304 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.37□□□□□ -2.19
VSX2P58304 U1.36-201ENST00000620684 176 ntBASIC1.37□□□□□ -2.19
VSX2P58304 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VSX2P58304 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.37□□□□□ -2.19
VSX2P58304 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VSX2P58304 AC245060.5-201ENST00000610778 3293 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNY1P10-201ENST00000363268 113 ntBASIC1.36□□□□□ -2.19
VSX2P58304 RNU6-378P-201ENST00000384324 107 ntBASIC1.36□□□□□ -2.19
VSX2P58304 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VSX2P58304 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VSX2P58304 MTCYBP2-201ENST00000407745 171 ntBASIC1.36□□□□□ -2.19
VSX2P58304 RNA5SP201-201ENST00000410316 124 ntBASIC1.36□□□□□ -2.19
VSX2P58304 RN7SKP51-201ENST00000410781 304 ntBASIC1.36□□□□□ -2.19
VSX2P58304 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.36□□□□□ -2.19
VSX2P58304 MTND1P26-201ENST00000440488 538 ntBASIC1.36□□□□□ -2.19
VSX2P58304 SNRPEP8-201ENST00000442866 260 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AL035666.1-201ENST00000446195 348 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AC130509.1-201ENST00000464158 433 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AK3P2-201ENST00000507976 429 ntBASIC1.36□□□□□ -2.19
VSX2P58304 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.36□□□□□ -2.19
VSX2P58304 RPL39P5-202ENST00000512505 151 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.36□□□□□ -2.19
VSX2P58304 CYP2C61P-201ENST00000604072 290 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.36□□□□□ -2.19
VSX2P58304 RMST_6.1-201ENST00000611980 203 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AC073114.1-201ENST00000612027 490 ntBASIC1.36□□□□□ -2.19
VSX2P58304 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
VSX2P58304 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.36□□□□□ -2.19
VSX2P58304 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VSX2P58304 RNU6-552P-201ENST00000362869 119 ntBASIC1.35□□□□□ -2.19
VSX2P58304 RNU6-1120P-201ENST00000362988 108 ntBASIC1.35□□□□□ -2.19
VSX2P58304 SNORA75-201ENST00000384158 137 ntBASIC1.35□□□□□ -2.19
VSX2P58304 Y_RNA.480-201ENST00000384364 102 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AL033519.2-201ENST00000403958 392 ntBASIC1.35□□□□□ -2.19
VSX2P58304 RNU2-29P-201ENST00000410423 189 ntBASIC1.35□□□□□ -2.19
VSX2P58304 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.35□□□□□ -2.19
VSX2P58304 MTATP6P18-201ENST00000417994 673 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AL353193.1-201ENST00000421444 268 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
VSX2P58304 RPS6P15-201ENST00000431996 751 ntBASIC1.35□□□□□ -2.19
VSX2P58304 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.35□□□□□ -2.19
VSX2P58304 MTND1P27-201ENST00000451117 902 ntBASIC1.35□□□□□ -2.19
VSX2P58304 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC022364.2-201ENST00000457963 554 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.35□□□□□ -2.19
VSX2P58304 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.35□□□□□ -2.19
VSX2P58304 CCDC34P1-201ENST00000507441 517 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.35□□□□□ -2.19
VSX2P58304 AC105417.1-201ENST00000514691 285 ntBASIC1.35□□□□□ -2.19
VSX2P58304 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.35□□□□□ -2.19
VSX2P58304 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.35□□□□□ -2.19
VSX2P58304 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.35□□□□□ -2.19
VSX2P58304 AC119751.7-201ENST00000600494 245 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AL391646.1-201ENST00000603860 190 ntBASIC1.35□□□□□ -2.19
VSX2P58304 RNU6-85P-201ENST00000605989 107 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC008536.2-201ENST00000607284 349 ntBASIC1.35□□□□□ -2.19
VSX2P58304 PCGEM1.1-201ENST00000613431 131 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC072046.2-201ENST00000618366 268 ntBASIC1.35□□□□□ -2.19
VSX2P58304 uc_338.11-201ENST00000619132 160 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AC130454.1-201ENST00000622948 401 ntBASIC1.35□□□□□ -2.19
VSX2P58304 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.35□□□□□ -2.19
VSX2P58304 LINC02555-201ENST00000563933 1951 ntBASIC1.35□□□□□ -2.19
VSX2P58304 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
VSX2P58304 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VSX2P58304 Y_RNA.399-201ENST00000383955 105 ntBASIC1.34□□□□□ -2.19
VSX2P58304 RNU6-160P-201ENST00000384591 107 ntBASIC1.34□□□□□ -2.19
VSX2P58304 SNORD73A-201ENST00000386062 65 ntBASIC1.34□□□□□ -2.19
VSX2P58304 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
VSX2P58304 AC004965.1-201ENST00000413033 213 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.34□□□□□ -2.19
VSX2P58304 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.34□□□□□ -2.19
VSX2P58304 RPL23AP95-201ENST00000426806 265 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AC078809.1-201ENST00000427601 140 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AL133396.1-201ENST00000432048 687 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.34□□□□□ -2.19
VSX2P58304 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.34□□□□□ -2.19
VSX2P58304 SNRPFP3-201ENST00000457792 225 ntBASIC1.34□□□□□ -2.19
VSX2P58304 RNU7-180P-201ENST00000459240 63 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.34□□□□□ -2.19
VSX2P58304 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.34□□□□□ -2.19
VSX2P58304 SNORA31.17-201ENST00000516953 127 ntBASIC1.34□□□□□ -2.19
VSX2P58304 MTCO2P4-201ENST00000517968 247 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AL137161.1-201ENST00000532231 390 ntBASIC1.34□□□□□ -2.19
VSX2P58304 HIF1AP1-201ENST00000553642 175 ntBASIC1.34□□□□□ -2.19
VSX2P58304 MTND3P12-201ENST00000559068 328 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AL391840.1-201ENST00000571144 367 ntBASIC1.34□□□□□ -2.19
VSX2P58304 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.34□□□□□ -2.19
VSX2P58304 MIR3136-201ENST00000583498 78 ntBASIC1.34□□□□□ -2.19
VSX2P58304 AC016925.2-201ENST00000605108 242 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms