Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MIR340-201ENST00000362125 95 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU1-62P-201ENST00000362599 164 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU1-96P-201ENST00000364163 162 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU6-1019P-201ENST00000364424 107 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU6-378P-201ENST00000384324 107 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 Y_RNA.480-201ENST00000384364 102 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU6-393P-201ENST00000384475 107 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 Y_RNA.560-201ENST00000384689 102 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 MIR454-201ENST00000390180 115 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNA5SP201-201ENST00000410316 124 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RNU4-46P-201ENST00000410818 138 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 C8orf59P1-201ENST00000429930 303 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 VN1R108P-201ENST00000431580 830 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AL596276.1-201ENST00000434465 418 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AC002486.1-201ENST00000435098 391 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 GTF2IP13-201ENST00000438487 386 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AC007395.1-201ENST00000451333 677 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RPS29P15-201ENST00000458329 171 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 RPS23P5-201ENST00000495419 428 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.17□□□□□ -2.22
CLDN18P56856 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 TRMT112P2-201ENST00000512910 132 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 AC084364.2-201ENST00000546924 395 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN18P56856 AC090517.1-201ENST00000569307 266 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AC005668.1-201ENST00000571142 476 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 MIR3976-201ENST00000606807 139 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.17□□□□□ -2.22
CLDN18P56856 MTND4P4-201ENST00000439033 1366 ntBASIC1.17□□□□□ -2.22
CLDN18P56856 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CLDN18P56856 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLDN18P56856 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 Y_RNA.4-201ENST00000362333 112 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 RNU6-1029P-201ENST00000384109 107 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 RNU6-434P-201ENST00000384376 107 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 RNU6-1065P-201ENST00000384513 106 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 MIR548B-201ENST00000385247 97 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 MIR758-201ENST00000390227 88 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 MIR208B-201ENST00000401172 77 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.16□□□□□ -2.22
CLDN18P56856 RPS27P16-201ENST00000425758 201 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC027119.1-201ENST00000440877 241 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.16□□□□□ -2.22
CLDN18P56856 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
CLDN18P56856 AL133217.1-201ENST00000450980 425 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 MTCYBP1-201ENST00000454315 1119 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN18P56856 AL163195.1-201ENST00000496941 348 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN18P56856 AC079140.5-201ENST00000507882 310 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 LRRC34P2-201ENST00000514850 553 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN18P56856 RNU6-1041P-201ENST00000516254 102 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 Y_RNA.676-201ENST00000516393 96 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 RNA5SP437-201ENST00000517249 129 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC103996.1-201ENST00000555468 102 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 CYP4A27P-201ENST00000567218 190 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 SNORA59B-202ENST00000578183 701 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 MIR4775-201ENST00000581168 75 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 VN1R107P-201ENST00000601784 209 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC136475.10-201ENST00000620253 385 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 AC095038.3-201ENST00000634439 195 ntBASIC1.16□□□□□ -2.22
CLDN18P56856 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CLDN18P56856 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
CLDN18P56856 RNY1P10-201ENST00000363268 113 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 SNORD32A-201ENST00000364805 84 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 RNU6-392P-201ENST00000364926 101 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 RNU6-827P-201ENST00000365553 106 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 RNU6-877P-201ENST00000383868 107 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 RNU6-331P-201ENST00000384724 107 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 SNORD70.1-201ENST00000391007 85 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
CLDN18P56856 MTCO3P29-201ENST00000432119 779 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 AC099677.2-201ENST00000436385 175 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 MTND1P18-201ENST00000448191 573 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.15□□□□□ -2.23
CLDN18P56856 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CLDN18P56856 MRPS36P3-201ENST00000519284 130 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 AP005597.4-201ENST00000526762 229 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN18P56856 RSL24D1P11-201ENST00000591045 491 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 AC022418.1-201ENST00000624118 445 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 MTND5P35-201ENST00000557537 1720 ntBASIC1.15□□□□□ -2.23
CLDN18P56856 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 MIR1-2-201ENST00000384961 85 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 Z99497.1-201ENST00000421282 135 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms