Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-336P-201ENST00000364891 107 ntBASIC2□□□□□ -2.09
VCPP55072 RNU4-20P-201ENST00000365601 151 ntBASIC2□□□□□ -2.09
VCPP55072 RNU6-483P-201ENST00000384088 108 ntBASIC2□□□□□ -2.09
VCPP55072 RNU6-1032P-201ENST00000384100 107 ntBASIC2□□□□□ -2.09
VCPP55072 RNU6-1245P-201ENST00000411130 106 ntBASIC2□□□□□ -2.09
VCPP55072 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
VCPP55072 POLHP1-201ENST00000411806 470 ntBASIC2□□□□□ -2.09
VCPP55072 AL117339.3-201ENST00000418733 162 ntBASIC2□□□□□ -2.09
VCPP55072 AC243964.1-201ENST00000441814 261 ntBASIC2□□□□□ -2.09
VCPP55072 MTND3P16-201ENST00000452205 344 ntBASIC2□□□□□ -2.09
VCPP55072 AC018868.1-201ENST00000491307 315 ntBASIC2□□□□□ -2.09
VCPP55072 AC091885.1-201ENST00000506658 268 ntBASIC2□□□□□ -2.09
VCPP55072 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2□□□□□ -2.09
VCPP55072 SNORA14.1-201ENST00000516113 141 ntBASIC2□□□□□ -2.09
VCPP55072 RNU6-189P-201ENST00000516120 101 ntBASIC2□□□□□ -2.09
VCPP55072 RNU6-1281P-201ENST00000516223 105 ntBASIC2□□□□□ -2.09
VCPP55072 RNU6-720P-201ENST00000516363 108 ntBASIC2□□□□□ -2.09
VCPP55072 AC034114.1-201ENST00000520293 285 ntBASIC2□□□□□ -2.09
VCPP55072 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2□□□□□ -2.09
VCPP55072 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2□□□□□ -2.09
VCPP55072 AL118558.2-201ENST00000556294 238 ntBASIC2□□□□□ -2.09
VCPP55072 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2□□□□□ -2.09
VCPP55072 AC093249.1-201ENST00000567049 203 ntBASIC2□□□□□ -2.09
VCPP55072 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2□□□□□ -2.09
VCPP55072 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
VCPP55072 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2□□□□□ -2.09
VCPP55072 AC103705.1-201ENST00000619013 241 ntBASIC2□□□□□ -2.09
VCPP55072 AL159153.1-201ENST00000619688 317 ntBASIC2□□□□□ -2.09
VCPP55072 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
VCPP55072 RNU6-1210P-201ENST00000363775 107 ntBASIC1.99□□□□□ -2.09
VCPP55072 RNU6-827P-201ENST00000365553 106 ntBASIC1.99□□□□□ -2.09
VCPP55072 Y_RNA.378-201ENST00000365652 113 ntBASIC1.99□□□□□ -2.09
VCPP55072 AL590002.1-201ENST00000406554 418 ntBASIC1.99□□□□□ -2.09
VCPP55072 RNU6-293P-201ENST00000411259 106 ntBASIC1.99□□□□□ -2.09
VCPP55072 AL030996.1-201ENST00000411430 235 ntBASIC1.99□□□□□ -2.09
VCPP55072 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.99□□□□□ -2.09
VCPP55072 EIF1AXP1-201ENST00000419267 435 ntBASIC1.99□□□□□ -2.09
VCPP55072 SEPT14P3-201ENST00000439401 183 ntBASIC1.99□□□□□ -2.09
VCPP55072 AL732372.2-207ENST00000445840 183 ntBASIC1.99□□□□□ -2.09
VCPP55072 SEPT14P2-201ENST00000453405 183 ntBASIC1.99□□□□□ -2.09
VCPP55072 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
VCPP55072 AC092436.3-201ENST00000511788 257 ntBASIC1.99□□□□□ -2.09
VCPP55072 SEPT14P4-201ENST00000513445 186 ntBASIC1.99□□□□□ -2.09
VCPP55072 FO082796.1-201ENST00000523795 183 ntBASIC1.99□□□□□ -2.09
VCPP55072 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.99□□□□□ -2.09
VCPP55072 EIF1P4-201ENST00000572664 335 ntBASIC1.99□□□□□ -2.09
VCPP55072 BNIP3P16-201ENST00000589779 534 ntBASIC1.99□□□□□ -2.09
VCPP55072 AC243960.4-201ENST00000600532 288 ntBASIC1.99□□□□□ -2.09
VCPP55072 AL162413.1-201ENST00000603198 110 ntBASIC1.99□□□□□ -2.09
VCPP55072 AC092747.3-201ENST00000603769 301 ntBASIC1.99□□□□□ -2.09
VCPP55072 MIR6504-201ENST00000613520 61 ntBASIC1.99□□□□□ -2.09
VCPP55072 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
VCPP55072 Y_RNA.3-201ENST00000362331 103 ntBASIC1.98□□□□□ -2.09
VCPP55072 RNU6-1222P-201ENST00000384615 107 ntBASIC1.98□□□□□ -2.09
VCPP55072 MIR518A2-201ENST00000384966 87 ntBASIC1.98□□□□□ -2.09
VCPP55072 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VCPP55072 RPS29P13-201ENST00000402041 169 ntBASIC1.98□□□□□ -2.09
VCPP55072 CBX3P9-201ENST00000402326 552 ntBASIC1.98□□□□□ -2.09
VCPP55072 RNU6-1068P-201ENST00000410958 103 ntBASIC1.98□□□□□ -2.09
VCPP55072 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
VCPP55072 AP000275.1-201ENST00000411943 390 ntBASIC1.98□□□□□ -2.09
VCPP55072 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.98□□□□□ -2.09
VCPP55072 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
VCPP55072 RNU7-138P-201ENST00000459479 64 ntBASIC1.98□□□□□ -2.09
VCPP55072 RPL30P1-201ENST00000488676 339 ntBASIC1.98□□□□□ -2.09
VCPP55072 AK3P2-201ENST00000507976 429 ntBASIC1.98□□□□□ -2.09
VCPP55072 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
VCPP55072 SNORD60.2-201ENST00000516883 86 ntBASIC1.98□□□□□ -2.09
VCPP55072 RNU6-586P-201ENST00000517265 104 ntBASIC1.98□□□□□ -2.09
VCPP55072 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.98□□□□□ -2.09
VCPP55072 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.98□□□□□ -2.09
VCPP55072 IMMP1LP2-201ENST00000552954 492 ntBASIC1.98□□□□□ -2.09
VCPP55072 AC103996.1-201ENST00000555468 102 ntBASIC1.98□□□□□ -2.09
VCPP55072 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.98□□□□□ -2.09
VCPP55072 AC026271.5-201ENST00000577873 130 ntBASIC1.98□□□□□ -2.09
VCPP55072 AC091135.1-201ENST00000585943 307 ntBASIC1.98□□□□□ -2.09
VCPP55072 VN1R107P-201ENST00000601784 209 ntBASIC1.98□□□□□ -2.09
VCPP55072 AC012557.2-201ENST00000605919 418 ntBASIC1.98□□□□□ -2.09
VCPP55072 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
VCPP55072 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
VCPP55072 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VCPP55072 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
VCPP55072 MIR181A1-201ENST00000385026 110 ntBASIC1.97□□□□□ -2.09
VCPP55072 MIR514A2-201ENST00000385131 88 ntBASIC1.97□□□□□ -2.09
VCPP55072 MIR514A3-201ENST00000385132 88 ntBASIC1.97□□□□□ -2.09
VCPP55072 ARL5AP1-201ENST00000418991 388 ntBASIC1.97□□□□□ -2.09
VCPP55072 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.97□□□□□ -2.09
VCPP55072 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.97□□□□□ -2.09
VCPP55072 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
VCPP55072 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.97□□□□□ -2.09
VCPP55072 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.97□□□□□ -2.09
VCPP55072 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.97□□□□□ -2.09
VCPP55072 RNU7-95P-201ENST00000459222 64 ntBASIC1.97□□□□□ -2.09
VCPP55072 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.97□□□□□ -2.09
VCPP55072 Y_RNA.654-201ENST00000497848 106 ntBASIC1.97□□□□□ -2.09
VCPP55072 AC091435.1-201ENST00000505442 584 ntBASIC1.97□□□□□ -2.09
VCPP55072 Y_RNA.655-201ENST00000515919 96 ntBASIC1.97□□□□□ -2.09
VCPP55072 AC016957.1-201ENST00000534895 309 ntBASIC1.97□□□□□ -2.09
VCPP55072 AC107304.1-201ENST00000604229 296 ntBASIC1.97□□□□□ -2.09
VCPP55072 AC004492.1-201ENST00000607036 742 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms