Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHB4P54760 RNU6-1301P-201ENST00000362724 104 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 Y_RNA.76-201ENST00000362931 109 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 RNU6-1159P-201ENST00000362933 107 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 Y_RNA.506-201ENST00000384494 102 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.54□□□□□ -1.84
EPHB4P54760 COX6CP10-201ENST00000416832 224 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 AL078601.1-201ENST00000444542 271 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 RPS26P21-201ENST00000475397 348 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 AC092185.1-201ENST00000491371 97 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHB4P54760 SNORA31.18-201ENST00000517043 134 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 RNA5SP165-201ENST00000517142 115 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.54□□□□□ -1.84
EPHB4P54760 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 MED28P6-201ENST00000558776 231 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHB4P54760 AC233981.2-201ENST00000611524 1614 ntBASIC3.54□□□□□ -1.84
EPHB4P54760 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.53□□□□□ -1.84
EPHB4P54760 RNU6-78P-201ENST00000362897 107 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 SNORA7.4-201ENST00000384249 137 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 BTF3L4P2-201ENST00000392798 346 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AL033519.2-201ENST00000403958 392 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
EPHB4P54760 RPL27AP8-201ENST00000424277 446 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.53□□□□□ -1.84
EPHB4P54760 HSPE1P25-201ENST00000455484 251 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 snoU13.30-201ENST00000458951 104 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 RPS29P26-201ENST00000477483 171 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.53□□□□□ -1.84
EPHB4P54760 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 RNA5SP217-201ENST00000515959 91 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 RNU6-1212P-201ENST00000517023 104 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 MRPS36P4-201ENST00000534436 298 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.53□□□□□ -1.84
EPHB4P54760 MIR2682-201ENST00000580305 110 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AC010928.2-201ENST00000588017 287 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 U4.7-201ENST00000638126 106 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 AC132825.6-201ENST00000638861 357 ntBASIC3.53□□□□□ -1.84
EPHB4P54760 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
EPHB4P54760 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB4P54760 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
EPHB4P54760 AC009541.1-201ENST00000438279 2662 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 RNU4-90P-201ENST00000362773 141 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 RNU6-682P-201ENST00000363843 106 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 RNU4-9P-201ENST00000364951 139 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
EPHB4P54760 RPL21P3-201ENST00000395517 478 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 MIR548I2-201ENST00000408348 149 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 AL358453.1-201ENST00000422522 250 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB4P54760 AL356867.1-201ENST00000429623 299 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB4P54760 AC108938.1-201ENST00000451204 136 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB4P54760 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB4P54760 AC146507.2-201ENST00000460608 476 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB4P54760 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB4P54760 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB4P54760 AC074198.2-201ENST00000508153 258 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB4P54760 RN7SKP132-201ENST00000516001 208 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 Y_RNA.683-201ENST00000516508 93 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 RNU6-861P-201ENST00000516745 106 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
EPHB4P54760 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB4P54760 MIR3921-201ENST00000577308 85 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB4P54760 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
EPHB4P54760 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB4P54760 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB4P54760 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
EPHB4P54760 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
EPHB4P54760 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.51□□□□□ -1.85
EPHB4P54760 AL136360.1-201ENST00000503377 1900 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB4P54760 RNU4-82P-201ENST00000362443 140 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 Y_RNA.44-201ENST00000362676 108 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 RNU6-879P-201ENST00000364328 108 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 RNU6-968P-201ENST00000384076 107 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 RNU6-843P-201ENST00000384454 104 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
EPHB4P54760 NDUFB4P7-201ENST00000423198 363 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 AL139132.1-201ENST00000431587 344 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 AC009296.1-201ENST00000443146 155 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 AC010265.1-201ENST00000513509 211 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.51□□□□□ -1.85
EPHB4P54760 RNA5SP291-201ENST00000517222 105 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.51□□□□□ -1.85
EPHB4P54760 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.51□□□□□ -1.85
EPHB4P54760 AL110115.1-201ENST00000614396 364 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 AC090132.2-201ENST00000615881 347 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 U6.98-201ENST00000637157 84 ntBASIC3.51□□□□□ -1.85
EPHB4P54760 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB4P54760 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB4P54760 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB4P54760 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms